Thiobacillus denitrificans: Tbd_0635
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Entry
Tbd_0635 CDS
T00275
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase HemN
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd00860
Porphyrin metabolism
tbd01100
Metabolic pathways
tbd01110
Biosynthesis of secondary metabolites
tbd01240
Biosynthesis of cofactors
Module
tbd_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Tbd_0635
Enzymes [BR:
tbd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
Tbd_0635
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
AAZ96588
UniProt:
Q3SL31
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All DBs
Position
673709..675079
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AA seq
456 aa
AA seq
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MSSTPLELLQKYSVPGPRYTSYPTAPYFHTGFGETDWREALARARSDRALSLYAHVPFCD
SLCYYCGCNMVATRDYSKTVPYLAAIEREMERTAALVDPGRVVRQLHWGGGTPTYLNPDD
IRRLMAMMQRNFTIAPDAEISCEVDPRELTYEHLAALRETGFNRLSFGVQDMDSDVQQAV
NRIQSEFLIRQVLDWARELGFSSINLDLIVGLPKQTVESFSRTLERVTNWAPDRLAVFAY
AHVPWIKKHQNLINEADLPDAATRLGLQQAVNDALAAAGYVNIGLDHFARPEDELVRAQQ
NKTLWRNFQGYTTHKDCDILAFGVSSISQTDDVYMQNDKNLKRYQDRAAANGFAVERGLR
LTRDDQVRRDAITRVMCDLELDFAAFGKEWDVSFGDYFADALVQLRPLADDGLVDIAADR
ISVTATGRLFLRNIGMCFDRYLKEAAGERPRYSRTA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacccccctcgaattgctccagaaatacagcgtgcccgggccgcgttatacg
tcctacccgaccgcgccctatttccacaccggcttcggcgagaccgactggcgcgaggcg
ctcgcgcgcgcgcgcagcgatcgcgccttgtcgctgtacgcgcacgtgccgttctgcgac
tcgctctgctactactgcggctgcaacatggtcgcgacgcgggactacagcaagaccgtt
ccctatcttgccgcgatcgagcgcgaaatggagcgcacggccgccctggtcgacccgggc
cgggtcgtgcgccagctgcactggggcggcggcacgccgacctacctcaaccccgacgac
atccgccgcctgatggcgatgatgcagcgcaatttcacgattgcgcccgacgccgagatc
agctgcgaggtcgatccgcgcgaactgacctacgagcatctggcggccttgcgcgagacc
ggcttcaatcgactgtcgttcggcgtgcaggacatggactccgacgtgcagcaggcggtc
aaccgcatccagtccgaattcctcatccgccaggtgctcgactgggcgcgcgaactcggt
ttttcgagcatcaacctcgacctgatcgtcggccttccgaaacagaccgtcgagagcttc
agccgcacgcttgagcgcgtcacgaactgggcgcccgaccgcctcgcggtcttcgcctat
gcgcacgtgccttggatcaagaagcaccagaacctgatcaacgaggccgaccttcccgac
gccgccacacggctcggcctgcagcaggccgtgaacgacgcgctcgccgcggccggctac
gtcaatatcggactcgaccatttcgcgcggcccgaggacgagctcgtgcgcgcgcagcag
aacaagacgctgtggcggaatttccagggctacacgacgcacaaggactgcgacatcctg
gccttcggcgtatcgagcatcagccagaccgacgatgtctacatgcagaacgacaagaat
ctcaagcgctaccaggatcgcgcggctgcgaacggcttcgcggtcgagcgcgggctgagg
ctcacgcgcgacgaccaggtccgtcgcgacgcgatcacgcgcgtgatgtgcgacctcgaa
ctcgatttcgccgcctttgggaaggaatgggacgtcagcttcggcgactacttcgccgac
gccctggtccagctacgcccgctggccgacgacggtctggtcgacatcgcggcggaccgg
atcagcgtcaccgcgacgggccgccttttcctgcgcaacatcggcatgtgcttcgaccgc
tacctcaaggaggcggccggtgagcggccgcgctattcccgcacggcctga
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