Thiobacillus denitrificans: Tbd_0695
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Entry
Tbd_0695 CDS
T00275
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbd03016
]
Tbd_0695
Enzymes [BR:
tbd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Tbd_0695
Transfer RNA biogenesis [BR:
tbd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tbd_0695
Prokaryotic type
Tbd_0695
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AAZ96648
UniProt:
Q3SKX3
LinkDB
All DBs
Position
complement(734853..735749)
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AA seq
298 aa
AA seq
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MKPARQAVDGVLLLNKPVGITSNAALQKAKWLLNAKKAGHTGTLDPFADGLLPLCFGEAT
KFSAYLLDADKRYRAILQLGVTTRTGDPEGEVLATREVRATCADIRAALPAFVGEIEQIP
PMHSALKHQGRPLYEYARAGVEIARAPRRVHIRALDLFKCAPPRAVVDVQCSAGTYVRTL
AEDLGNALGCGAHLTALTRTASGGFLLEQAHTLAELEATNAGARQALLLPADCLVAHLPS
VHLGETAAASLRQGRSVPDAADRRGLVRVYDGHGVFVGLAEAEAGKLVPRRLIATVQA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcccgcccgccaagctgtcgatggcgtgctgctgctgaacaagccggtcgggatc
acctccaacgccgcgctgcagaaggccaagtggctgctgaacgcgaagaaggccggccac
accggtacgctcgaccccttcgccgacggcctcctgccgctctgcttcggcgaggcgacc
aagttctcggcctatctgctcgacgccgacaagcgctatcgcgcgatcctgcaactcggc
gtcacgacgcgcaccggcgaccccgagggcgaggtgctcgcgacccgcgaagttcgcgcg
acctgcgccgacatccgcgcggcgcttcccgctttcgtcggtgaaatcgaacagatcccg
ccgatgcattcggcactcaagcatcaggggcgtccgctctacgagtacgcgcgtgccggc
gtcgagatcgcgcgtgcgccgcgccgggtgcatatccgcgccctcgacctcttcaaatgc
gccccgccccgcgcggtcgtcgacgtgcaatgcagcgcgggcacctacgtccgcacgctg
gccgaagacctcggcaacgcgctcggctgcggcgcccacctcacggccctcacccgcacc
gcgtcgggcggattcctgctcgaacaggcacacacgctcgccgaactcgaggcgaccaac
gcgggggccaggcaggccctgctgctacccgcggactgcctcgtcgcgcatctgccgagc
gtgcacctcggcgagaccgccgccgcgtccttgcgccagggccggagcgtgcccgacgct
gcggatcgccgtggactcgtgcgcgtgtacgacggccacggggtatttgtcggtctcgcc
gaagcggaagccggaaagctggtcccgcgacgcctgatcgccaccgtgcaggcttga
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