Thiobacillus denitrificans: Tbd_0745
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Entry
Tbd_0745 CDS
T00275
Name
(GenBank) conserved hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbd03032
]
Tbd_0745
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_0745
Enzymes [BR:
tbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Tbd_0745
DNA replication proteins [BR:
tbd03032
]
Prokaryotic type
DNA Topoisomerases
Tbd_0745
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tbd_0745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
AAZ96698
UniProt:
Q3SKS7
LinkDB
All DBs
Position
complement(788923..789993)
Genome browser
AA seq
356 aa
AA seq
DB search
MSAYPARATPPRNAPSDPRASAPEGLNYIGAGTPGIRRVRRGARFVYLDPDGRRIRDREE
IARIARLAIPPAYVDVWICADPRGHLQATGRDARGRKQYRYHPAWIAARGTDKYCRMLGF
GHALPKLRAAIAAHLDAPGLAADKVMATVVALLEQTLIRVGNPQYARENASFGLTTLQNR
HVAVRGSAVQFRFTGKSGIKHCRTLEHPRLARILKRCQELPGQQLFQYLDTDGHPRPVTS
NDVNAYLRAHGGGDYTAKDYRTWAGSALALALFRRLPWQSRGEAERRVSGVIAEVAAQLG
NTPAVCRKCYVHPAIVEAFVAGELAALARPRRRKHLNADEAALLGFLETQHEARCA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtaccccgcccgcgcgacgcccccgcggaacgcgccgtccgacccgcgcgcg
agtgcgcccgagggcctcaactacatcggcgccggcacgccgggcatccggcgggtgcgc
cgcggcgcgcgcttcgtctacctcgacccggacggccggcgcatccgggaccgcgaggaa
atcgcacgcatcgcccggctcgcgatcccgccggcctacgtcgacgtctggatctgcgcc
gatccgcgcgggcacctgcaggcgaccgggcgcgacgcgcggggacgcaagcagtaccgc
taccatccggcgtggatcgcggcgcgcggcaccgacaagtactgccgcatgctcggcttc
ggccacgcgctgccgaagctgcgcgcggcgatcgcggcccatctcgacgcgccggggctg
gcggccgacaaggtcatggcgaccgtcgtcgccctgctcgaacagacgctgatccgggtc
ggcaacccgcaatacgcgcgcgagaacgcgtccttcgggctgaccacgctgcagaaccgg
cacgtcgcggtgcgcggcagcgccgtgcagtttcgcttcaccggcaagagcggcatcaaa
cattgccgcacgctcgagcatccccgcctcgcgcgcatcctcaagcgttgccaggagctg
cccgggcagcagctttttcaatatctcgacaccgacggccacccgcggccggtgacttcg
aacgacgtcaacgcctatctccgggcacacggcggcggcgactacaccgccaaggattac
cgcacctgggccggcagcgcgctcgcgctcgcgctattccgtcgcctgccctggcagagc
cgcggcgaggccgagcgccgggtctccggggtcatcgccgaggtcgccgcgcagctcggc
aacacgccggcggtctgcaggaagtgttacgtccatccggccatcgtcgaggccttcgtc
gcgggcgaactcgcggccctcgcccgtccgcggcgccgcaagcatctgaacgccgacgag
gccgcgctgctcggctttctcgaaacgcagcacgaggcgcgctgcgcctga
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