Thiobacillus denitrificans: Tbd_0810
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Entry
Tbd_0810 CDS
T00275
Name
(GenBank) pseudouridine synthase, RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbd03009
]
Tbd_0810
Enzymes [BR:
tbd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Tbd_0810
Ribosome biogenesis [BR:
tbd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Tbd_0810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AAZ96763
UniProt:
Q3SKL6
LinkDB
All DBs
Position
851682..852638
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AA seq
318 aa
AA seq
DB search
MMDDYKGNSGGDVRELVIPDAQGGLRLDQALSALLPEFSRNRIQNWIRARKIVVDDAWGT
TKMKVSGGESVRVQVEPDPGATPDAPEAIPLDVVYEDSMLLVINKPVGLVVHPGSGNRDG
TLLNALLHRVPQVAELPRAGIVHRLDKDTSGLLVVAKTLRAHTDLVRQLQARTVKREYLA
LVYGEVDRGGTVDAPLARDPHNRTKRTVHSLGKEAVTHYDVVERFPGITLLRCKLETGRT
HQIRVHMQHVGHPLVGDTVYSASRRSHLKIPFPRQALHAEKLGLIHPVTGEFVHWECPLP
PDFGSLLQALRDNTDWVK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgatggacgattataagggaaatagcgggggcgacgtccgcgagctcgtcatccccgac
gcgcagggcgggctgcgtctggatcaggccttgtcggccctgctgccggagttttcgcgc
aaccgcatccagaactggatccgtgcgcgcaagatcgtcgtcgacgacgcctggggcacg
accaagatgaaggtcagcggcggcgaatcggtccgcgtccaggtcgagcccgacccgggc
gcgacgcccgacgcgcctgaggcgattccgctcgacgtcgtctacgaggactcgatgctg
ctcgtcatcaacaagccggtgggcctcgtcgtccatcccggcagcggcaaccgcgacggc
acgctgctcaacgcgctgctgcaccgcgtgccgcaggtcgccgaattgccgcgcgcgggc
atcgttcaccggctcgacaaggacacctcgggtctgctcgtcgtcgccaagacgctgcgt
gcccacaccgacctcgtgcgccagctgcaggcgcgcaccgtcaagcgcgaatatctggcg
ctggtgtacggcgaggtcgaccgtgggggcaccgtcgacgcgccactcgcgcgcgacccg
cacaaccgcaccaagcgcacggtccacagcctcggcaaggaagccgtcacccattacgac
gtggtcgagcgctttcccggcatcacgctcctgcgctgcaagctcgagaccggccgcacc
caccagatccgcgtgcacatgcagcacgtcggccacccgctggtcggcgacacggtctac
agcgcaagccgccgcagccatctcaagattccgttcccgcgccaggcgctgcatgccgag
aaacttggtctgatccatcccgtgaccggcgaattcgtgcactgggaatgcccgctgccg
cccgacttcggctcgctgctgcaggccttgcgcgacaacaccgactgggtcaagtga
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