Thiobacillus denitrificans: Tbd_0948
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Entry
Tbd_0948 CDS
T00275
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbd03032
]
Tbd_0948
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_0948
Enzymes [BR:
tbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Tbd_0948
DNA replication proteins [BR:
tbd03032
]
Prokaryotic type
DNA Topoisomerases
Tbd_0948
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tbd_0948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AF0941-like
Motif
Other DBs
NCBI-ProteinID:
AAZ96901
UniProt:
Q3SK89
LinkDB
All DBs
Position
1008562..1011111
Genome browser
AA seq
849 aa
AA seq
DB search
MEQFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTMVRMAQDFSLRYPLIDGQGNFGSVDGDNAAAM
RYTEVRMARIAHELLADLDKETVDFGPNYDGSEQEPLVLPTKIPNLLINGSSGIAVGMAT
NIPPHNLTDICNALFALLDAPATDIESLISIVQAPDFPTAGIIYGLSGVRDGYRTGRGRV
VMRATCHVEDLDKSGGKQAIIIDELPYQVNKANLLIRIGELVRDKQIDGIADLRDESDKS
GMRVYIELKRGENADVVLNNLYKQTQMQDTFGMNMVALIDGQPRLLNLKEMLDAFLRHRR
EVVTRRTVFDLRKARERGHILEGLAVALANVDEIVELIKSSETPAIAKERLLGRAWKSAM
VEEMLARIDPEYSRPVNMGPEFGLHADGYHLSEIQAQRILEMQLQRLTNLESDKILAEYK
EIMAKIADLLDILANPARITQIIREELTQVRDQFGDGRRSTIVENAQDMSMEDLIKPEEM
VVTLSHGGYMKSQPLDDYRAQKRGGRGKQAAGTKDEDFIEKMFVANTHDYILCFSNRGRL
YWLKVYNVPQGGRAARGKPIVNLLPLEDGEKISALLPVKTFDDEHYVFMATANGIVKKTP
LSEFSRPRTAGIIAVGLDDGDVLCGASITDGRHDVMLFSDSGKAVRFDENDVRPMGRAAR
GVIGMKLAKGAKLISLLVAEDENDFVLTATENGYGKRTPIAEYTRHARATQGMIAIQTSE
RNGKVVAANLVKADDEIMLITTGGVLIRTRVKEIRAMSRATQGVTLINLDKGEKLISLEK
VAETDNEEE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtttgccaaggaaaccctcccggtcagtctcgaggaggagatgcggcgttca
tacctcgattatgcgatgagcgtgatcgtcggccgtgcactccccgacgtgcgcgacggg
ctcaagcccgtgcaccgtcgtgtgctgtacgcgatgaacgagcttggcaacgactggaac
aaggcttacaagaagtcggcgcgcgtcgtcggcgacgtcatcggtaaataccacccgcac
ggcgacacggccgtctacgacaccatggtccgcatggcgcaggacttctcgctgcgctac
ccgctgatcgacggccagggcaacttcggctcggtcgacggcgacaacgccgcggcgatg
cgttacaccgaagtgcgcatggcgcggatcgcgcacgagttgctggccgacctcgacaag
gaaacagtcgacttcggccccaactacgacggctccgagcaggagccgctcgtgctgccg
accaagattccgaatctgctgatcaacggttcgtcgggcatcgcggtcggcatggcgacg
aacatcccgccgcacaatctcaccgacatctgcaacgccctgttcgcgctgctcgacgcc
cccgcgaccgacatcgagtcgctgatcagcatcgtccaggcgcccgactttccgaccgcc
ggcatcatctacggcctttccggcgtgcgcgacggctaccgtaccggtcgcggccgcgtc
gtcatgcgtgcgacctgccacgtcgaggacctcgacaagagcggcggcaagcaggcgatc
atcatcgacgagctgccctatcaggtgaacaaggccaatctgctgatccggatcggcgaa
ctcgtgcgcgacaagcagatcgacggcatcgccgacctgcgcgacgagtccgacaagtcg
ggcatgcgcgtctacatcgaactcaagcgcggcgagaacgccgacgtggtcctgaacaat
ctgtacaagcagacacagatgcaggacaccttcggcatgaacatggtcgcgctgatcgac
gggcagccgcggctcctgaacctcaaggagatgctcgacgccttcctgcgccaccgccgt
gaagtcgtcacccggcgcaccgtcttcgatctcaggaaggcacgcgagcgcggccacatc
ctcgagggcctggcggtcgcgctcgccaacgtcgacgagatcgtcgagttgatcaagtcg
tcggaaacgcctgcgatcgcgaaggaacgcctgctcggccgcgcgtggaagtcggcgatg
gtcgaggagatgctcgcgcgcatcgaccccgaatattcgcggccggtgaacatggggccg
gaattcggcctgcacgccgatggctatcacctctcggaaatccaggcgcagcgcatcctc
gaaatgcagttgcagcgcctgaccaacctcgagtcggacaagatcctcgccgagtacaag
gaaatcatggcgaagatcgccgacctgctcgacattctggcgaatccggcgcgcatcacc
cagatcatccgcgaggaactgacccaggtccgcgaccagttcggcgatgggcggcgctcg
accatcgtcgagaacgcgcaggacatgtcgatggaagacctgatcaagcccgaggagatg
gtcgtcacgctgtcacacggcggctacatgaagtcgcagccgctggatgattaccgagca
cagaagcgcggcggccgcggcaagcaggcggcggggaccaaggacgaggacttcatcgag
aagatgttcgtcgccaacacccacgactacatcctctgcttctccaaccgcgggcggctg
tactggctcaaggtctacaacgtgccacagggcggacgcgccgcccgcggcaagccgatc
gtcaacctgctaccgctcgaggacggcgagaagatcagcgcgctcttgccggtcaagacc
ttcgacgacgagcactacgtgttcatggcgaccgccaacggcatcgtcaagaagacgccg
ctttccgaattctcgcgcccgcgcacggccggcatcatcgcggtcggcctcgacgacggc
gatgtgctgtgcggtgcgtcgatcaccgacggtcgtcacgacgtgatgctgttctccgat
tccggcaaggccgtgcgcttcgacgagaacgacgtgcgcccgatgggccgtgccgcgcgc
ggcgtgatcggcatgaagctcgccaagggcgccaagctgatctcgttgctcgtggctgaa
gacgagaacgacttcgtgctcacggcgaccgaaaacggctacggcaagcggacgccgatc
gcggaatacacgcgtcacgcgcgggccacgcaaggcatgatcgcgatccagaccagcgag
cgcaacggcaaggtcgtcgcggccaacctcgtcaaggcggacgacgaaatcatgctgatc
acgaccggcggcgtgctgatccgcacgcgcgtcaaggagatccgcgcgatgagccgggcg
acccagggcgtcacgctgatcaatctggacaagggcgaaaagctcatcagcctggaaaaa
gtagccgagaccgacaacgaagaggaatga
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