Thiobacillus denitrificans: Tbd_0957
Help
Entry
Tbd_0957 CDS
T00275
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbd03032
]
Tbd_0957
03036 Chromosome and associated proteins [BR:
tbd03036
]
Tbd_0957
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_0957
DNA replication proteins [BR:
tbd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Tbd_0957
Chromosome and associated proteins [BR:
tbd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Tbd_0957
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Tbd_0957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AAZ96910
UniProt:
Q3SK80
LinkDB
All DBs
Position
1020248..1020532
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIAQLAGRHSQFSIADIEMAVKTILDALAKNLSRGERIEIRGFGSFSLSFRPARL
GRNPKSGERVQVPAKYVPHFKAGKELRDRVDFPL
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgagctgattgctcaactggcggggcggcattcgcagttttcgatcgcg
gatatcgaaatggcggtgaaaacgatcctcgacgcgctggcgaagaacctgtcgcgcggg
gagcgcatcgagatccgcggtttcggcagcttcagcctgagctttcgacccgcgcgtctc
ggtcgcaaccccaagtcgggcgagcgcgtgcaggtgccggcgaagtatgtgccgcacttc
aaggccggcaaggaactgcgcgaccgcgtcgatttcccgctgtag
DBGET
integrated database retrieval system
