Thiobacillus denitrificans: Tbd_0965
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Entry
Tbd_0965 CDS
T00275
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_0965
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tbd_0965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
ChlI
Lon_C
DnaB_C
AAA_22
AAA_16
GvpD_P-loop
ABC_tran
AAA_28
Rad51
nSTAND_NTPase5
AAA_14
AAA_24
nSTAND3
AAA_29
DUF8455
NTPase_1
SLFN-g3_helicase
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AAZ96918
UniProt:
Q3SK72
LinkDB
All DBs
Position
1027097..1028449
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AA seq
450 aa
AA seq
DB search
MAKAKTVYTCTECGGSSPKWQGQCPACNAWNTLVETIAETAKPRFAALAATSQVQLLHEV
EASEESRIATGIGELDRVLGGGLVPGGVTLIGGDPGIGKSTLLLQALAGLAERMGTLYVS
GEESARQVALRARRLALPETRLPVLPEIRLEAILAQLAATSPEVAVVDSIQTVYSEALTS
APGSVAQVRECAAQLTRHAKQSGTAVILVGHVTKEGAIAGPRVLEHIVDTVLYFEGDTGS
SYRLVRAFKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSRHGEPVPGSCVLVTQEGTRP
LLVEIQALVDTSHAPNPRRLSVGLEQNRLAMLLAVLHRHAGIACFDQDVFVNAVGGVKIS
EPAADLAVLAAIVSSLRSQPLPDKLVMFGEVGLAGEIRPVQRGQERLKEAAKLGFTQAIV
PAANQPKQKIAGMTVHAVQRLDDAISLFRG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggccaaaacggtttacacctgcaccgagtgcggcggcagctcgcccaaatgg
cagggccagtgcccggcgtgcaacgcctggaacacgctggtcgagacgatcgccgagacg
gcaaagccccgcttcgccgcgctcgcggcgacgagtcaggtacagctgctgcacgaggtc
gaggcctcggaggaaagccgcatcgcgacagggatcggcgaactcgaccgcgtcctgggc
ggcggcctcgtcccgggcggcgtcacgctgatcggcggcgacccgggcatcggaaaatcg
acgctgctgctgcaggcgctcgccgggctggcggagcgcatggggacgctctacgtcagc
ggcgaggaatcggcacgtcaggtcgccttgcgcgcccggcgtcttgccctgcccgaaacg
cggctgccggttttgcccgagattcggctcgaggcgatcctcgcgcagctcgcggcgacc
tcgcccgaggtcgccgtcgtcgactcgatccagaccgtttattcggaggccctgacctcg
gcgccgggatcggtcgcgcaggtgcgcgagtgcgcggcgcagctcacccgccacgccaag
cagagcggcaccgcggtcatcctggtcgggcacgtcaccaaggaaggcgcgatcgccggg
ccgcgcgtgctcgagcacattgtcgacaccgtgttgtacttcgagggggacacgggctcg
agctaccgcctcgtgcgcgcgttcaagaaccgcttcggggcggtcaacgagatcggcgtg
ttcgcgatgaccgaaaagggcctgaagggcgtttcgaacccctcggcaatctttctctcg
cgtcacggcgagcccgtgccgggttcgtgcgtgctcgtgacgcaggaaggaacgcgcccg
ctcctcgtcgagatccaggcgctcgtcgacacgagtcacgcgcccaatccacgccgtctg
agtgtcggcctcgagcagaaccgtctcgcgatgctactcgccgtcttgcatcgccacgcc
ggcatcgcctgtttcgatcaggacgtcttcgtcaacgcggtcggcggggtgaagatcagc
gagccggcggccgacctcgccgtcctggccgcgatcgtgtcgtcgcttaggagccagccg
ctgcccgacaagctcgtgatgttcggcgaagtggggctcgccggcgagatccgtccggtg
cagcgcggacaggagcgcctgaaggaagcggccaagctcggcttcacccaggccatcgtg
ccggccgcgaaccagcccaagcagaaaatcgccggcatgacggtgcacgcggtgcagcgt
ctcgacgacgcgatcagcctgttccgcggctag
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