Thiobacillus denitrificans: Tbd_0970
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Entry
Tbd_0970 CDS
T00275
Name
(GenBank) 23S rRNA methyltransferase/RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbd03009
]
Tbd_0970
Enzymes [BR:
tbd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Tbd_0970
Ribosome biogenesis [BR:
tbd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Tbd_0970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_ANTKMT
MTS
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_12
PabTrmU54_TRAM_dom
Methyltransf_37
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AAZ96923
UniProt:
Q3SK67
LinkDB
All DBs
Position
complement(1033581..1034879)
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AA seq
432 aa
AA seq
DB search
MNPVVDILSLDHEGHGVARLDGKVTFVDGALAGERAEIAIFRKHAKYNSANAVAILAPSA
QRAEPRCRYFGRCGGCSMQHLEPSAQVAAKQRVLEENLARIGKVRPSVLLPALHGPSWGY
RGRARLSVRRVEKKGGVLVGFHEKRSSFIADMASCEVLAPGVSALIQPLRELIGRLSNAD
RIPQIEVAAGEHVIVLVFRLLEPWNDDDAAHVRAFADAHHVQVWEQRKGPETARPFWPDI
APELSYGLPEFGLVMPFRPTEFTQVNSAINRALVSRALRLLDPRPGERIADLFCGLGNFT
LPIAHRGADVLGIEGSTELVARARENALRNALPHARFEVDNLFEMTPEKFAALGPFDKLL
IDPPRSGAIEVVKSLPEAGAPRRIVYVSCDPATLARDAEVLVHVKGYRLEAAGVANMFPH
TAHVESIALFER
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggtcgtcgacatcctttccctcgatcacgagggccacggcgtcgcacgcctc
gacggcaaggtcaccttcgtcgacggcgcgctggccggcgagcgcgcggaaatcgcgatc
tttcgcaagcacgccaagtacaactcggccaatgcggtcgcgattctcgcgcccagcgcg
cagcgcgcagaaccgcgttgccgctatttcggccgctgcggcggctgctcgatgcagcat
ctcgagccgagcgcccaggtcgcggccaagcaacgcgtgctcgaggaaaacctcgcccgc
atcggcaaggtccgccccagtgtcctgctgccggcgctgcacggcccgagctggggctac
cgcggccgcgcgcgcctctcggtgcgccgcgtcgagaagaaaggcggcgtgctggtgggc
tttcacgagaagcgctcgagcttcatcgccgacatggccagctgcgaggtgctcgccccc
ggcgtgtcggccctgatccagccgctgcgcgagctgatcggccgcctgtcgaacgccgac
cgcatcccgcagatcgaagtcgccgccggcgaacacgtcatcgtgctggtgttccgcctg
ctcgaaccctggaacgacgacgatgcggcgcacgttcgcgcattcgccgacgcgcaccac
gtgcaggtctgggagcagcgcaagggtccggagaccgcgcgcccgttctggcccgacatc
gcgccggaattgagctacggcctgcccgaattcgggctggtaatgcctttccggccgacc
gagttcacccaagtcaacagtgcgatcaaccgcgcgctcgtgagccgcgcgctgcgcctg
ctcgacccgcggccaggcgaacgcatcgccgacctgttctgcggcctcggcaacttcacg
ctgccgatcgcgcaccgcggcgccgacgtcctcggcatcgagggcagcacggagctcgtc
gcccgggcgcgcgaaaacgccctgcgcaacgccctgccccacgcgcgattcgaggtcgac
aacctgttcgagatgacgccggaaaaattcgccgcgctcgggcccttcgacaagctgttg
atcgaccccccgcgctcgggcgcgatcgaggtcgtgaagtcgctgccggaggccggcgcg
ccccgccgcatcgtctacgtttcctgcgatccagcgacgctcgcacgcgatgccgaggtg
ctcgtccacgtcaagggctaccggctggaagcggccggcgtcgccaacatgttccctcac
accgcgcacgtcgaatcgatcgcgctattcgagcgctaa
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