Entry |
|
Name |
(GenBank) 2',5' RNA ligase
|
KO |
|
Organism |
tbd Thiobacillus denitrificans
|
Brite |
KEGG Orthology (KO) [BR:tbd00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:tbd03016]
Tbd_1005
Enzymes [BR:tbd01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Tbd_1005
Transfer RNA biogenesis [BR:tbd03016]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Tbd_1005
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1072649..1073200
|
AA seq |
183 aa
MADSRTPDVPSLRLFFALWPDDATRDALDRTGKWLHRHWGGRRMRAETLHITLAFLGTTP
ADRLDALIGCADGIAAEPFALVLDRPGYWRHNHVGWLGASEAPPPHLALVTALNAALQAG
GFPVDARAHVPHVTLLRNTAGGDLPLCRPVSWAVPDFVLVRSRTDPTGAQYEVIRRWLLV
HPK |
NT seq |
552 nt +upstreamnt +downstreamnt
gtggctgactcccgcacgccggacgtcccttccctccgcctgttcttcgccctgtggccg
gacgacgccacccgcgacgcgctcgaccgcaccggcaagtggctgcatcggcactggggc
gggcggcgcatgcgtgccgagaccctgcacatcacgctcgcctttctcggcacgacgccc
gccgacaggctcgacgcgcttattggctgcgccgacggcatagccgccgagcccttcgcg
cttgtgctcgaccggcccggctactggcggcataaccatgtcggctggctcggcgcgagt
gaggcgccgccgcctcatctcgcgctcgtgacggcgctcaatgccgctctccaggcgggc
ggttttccggtcgatgcacgtgcgcacgtgcctcatgtcacgctgttgcgcaacaccgcc
ggcggcgacctgcccctatgcaggccggtaagttgggcggtcccggatttcgtgctcgtg
agatcccgtaccgatcccacaggtgcgcagtacgaagtgattcgacgctggctgctggtc
catcctaaatga |