Thiobacillus denitrificans: Tbd_1180
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Entry
Tbd_1180 CDS
T00275
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd02020
Two-component system
tbd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tbd_1180
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tbd_1180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbd03021
]
Tbd_1180
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tbd02035
]
Tbd_1180
Transcription machinery [BR:
tbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tbd_1180
Bacterial motility proteins [BR:
tbd02035
]
Flagellar system
Flagellar assembly proteins
Stator
Tbd_1180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
TH_ACT
Motif
Other DBs
NCBI-ProteinID:
AAZ97133
UniProt:
Q3SJM1
LinkDB
All DBs
Position
1240327..1241037
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AA seq
236 aa
AA seq
DB search
MVGKPSSQDEQITKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDAVSRFDGTQGA
QFESYATQRIRGAMLDELREADWLPRHVRQKSRQIEAAIHKLEQRHGKAPSESEISAELG
IPIDQYQSMLGDVKCSQLLYYEDFSDEDSASFLERYLVDGSNDPLAVLEDEGFRASLIAA
IHHLPERERSMMGMYYEQDMNLKEIGAVLGVSESRVCQLHSQAVARLRAQLKIWKD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtaaaccatcgtcgcaggacgagcagatcaccaaatatgcaccgctggtcaag
cgcatcgcgtatcacatgatggcgcgcctgccggccagcgtcgaagtcgacgacctgatc
caggtcgggttgatcggcctcatggacgccgtatcgcgcttcgacggcacgcagggtgcg
caattcgagtcgtatgcgacgcagcgcatccgtggcgcgatgctcgacgagttgcgcgag
gcggactggctgccgcgccacgtacggcagaagtcacggcagatcgaagcggcgatccac
aagctcgaacagcggcacggcaaggcgccgagcgagtcggaaatatcggccgaactcggc
attccgatcgatcagtaccagtcgatgcttggcgacgtcaaatgctcgcagctgctctac
tacgaggatttttccgacgaggacagcgcgagttttctcgaacgctatctcgtcgacggc
agcaacgatccgctcgcggtgctcgaggacgagggcttccgcgccagcctgatcgcagcg
atccatcacctgcccgagcgcgagcgcagcatgatgggcatgtactacgagcaggacatg
aacctcaaggagatcggcgcggtgctcggcgtctccgaatcacgcgtatgccagctgcac
tcgcaggccgtcgcgcggctgcgcgcgcaactcaagatctggaaagactga
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