Thiobacillus denitrificans: Tbd_1230
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Entry
Tbd_1230 CDS
T00275
Name
(GenBank) extracellular solute-binding protein, family 3
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tbd01011
]
Tbd_1230
Enzymes [BR:
tbd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Tbd_1230
Peptidoglycan biosynthesis and degradation proteins [BR:
tbd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Tbd_1230
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AAZ97183
UniProt:
Q3SJH8
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All DBs
Position
complement(1288506..1289918)
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AA seq
470 aa
AA seq
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MPSLKTKGAAGKFASLLLVLALSACSRPAPPPETSGELRVGTRNSPATFYIGHDGETAGF
EHDLILAFSRAQNWTLSWTEKSRPQALFDMLERREIHLAAAALPQAVVKDRHLISGPILF
ETPVHVVYRTADRAPRGVAGLAGKKLAFIIGSGHGPMLMRLKRKHPELSWAAVENVWPEE
LLAQLQAGKYDAVIINGMDFDAMRNFYPGLAVAFDLPYKQKIVWALSPGSSHAFRNALAR
FVERARSDGTIKRALERYFGHVKRLGSSDILGILQRRPQRLPDLREHFQEAQTLSGIDWR
LLAAIGYQESQWNRLATSPTGVRGVMMLTGETADRMGVSDRLNARESILGGARYLALLKD
ALPARIAEPDRTWLALAAYNQGQGHLEDARRIAQARGGDPNSWADVKEALPYLSRGSYAK
VMKYGYARGGEALRFAENIRNYYDILLRLEPEYDPLINLGRGEDGLPPPG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctcaagacaaagggagcggccgggaaattcgcttcgttgctgctggtgctc
gcgctgagcgcctgcagccggcccgcgccgccgccggaaacgagcggcgaattgcgcgtc
gggacacgcaacagtccggccaccttttacatcggccacgacggcgaaaccgcgggattc
gaacacgacctcatcctcgcattcagccgcgcacaaaactggacgctcagttggaccgaa
aagtcccggccacaggcgctgttcgacatgctcgagcggcgcgaaatccatctcgcggcg
gctgcgctgccgcaggccgtggtcaaggaccgccacctgatctccggtccgatcctgttc
gagaccccagtccacgtcgtctatcgcacagccgatcgcgcgccgcgcggcgtcgccgga
ctcgccggaaaaaaactcgcattcatcatcggctccgggcacggcccgatgctcatgcgg
ctgaaacgcaagcacccggaactcagctgggccgcggtggagaacgtctggcccgaggaa
ttgctcgcgcaactgcaggcgggcaagtacgacgcggtgatcatcaacggcatggatttc
gacgcgatgcgcaacttctatcccggcctcgccgtcgccttcgatctgccgtacaagcaa
aaaatcgtctgggcgctgtcgcccggcagttcgcacgcctttcgcaacgcgctcgcacgc
ttcgtcgaacgcgcgcgctcggacggcacgatcaagcgcgcgctggaacgctacttcggg
cacgtcaagcgcctgggcagcagcgacattctcggcatcctgcaacgccgcccgcaacgc
cttccagacctgcgcgagcatttccaggaagcgcagacgctgagcggaatcgactggcgt
ctgctcgccgcgatcggctaccaggaatcgcagtggaaccgtctggcgacctcgccaacc
ggcgtgcgcggcgtgatgatgctgaccggcgagacggcggaccgcatgggggtcagcgac
cgcctcaacgcgcgcgagagcatcctcggcggcgcacgctatctggcgctgttgaaggac
gcgcttcccgcacgcatcgccgagccggatcgcacttggctcgcgctcgctgcctacaac
cagggtcagggccacctcgaggacgcgcggcggatcgcgcaggcacgcggcggcgacccg
aacagctgggcggacgtcaaggaggcgctgccctacctgagccgcggcagctacgcgaag
gtcatgaaatacggctatgcgcgcggcggcgaagcgctgcgcttcgccgagaacatccgc
aactactacgacatcctgctgcggctcgagcccgaatacgatcccttgatcaatctcggg
cgaggcgaagacggcctgccaccgccgggctga
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