Thiobacillus denitrificans: Tbd_1249
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Entry
Tbd_1249 CDS
T00275
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd02020
Two-component system
tbd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tbd_1249
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tbd_1249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbd03021
]
Tbd_1249
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tbd02035
]
Tbd_1249
Transcription machinery [BR:
tbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tbd_1249
Bacterial motility proteins [BR:
tbd02035
]
Flagellar system
Flagellar assembly proteins
Stator
Tbd_1249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
MarR
HTH_28
UPF0154
HTH_Tnp_4
PLRV_ORF5
Motif
Other DBs
NCBI-ProteinID:
AAZ97202
UniProt:
Q3SJF9
LinkDB
All DBs
Position
1311870..1312610
Genome browser
AA seq
246 aa
AA seq
DB search
MYTASGKTAKSEKNDLLEQYMPMVKRLAHHMMGRLPPSVEEDDLVQAGMIGLLDAVSRYD
EAQSAQFEAYAIQRIRGSMIDELRQSDWMPRSARQSMRKIEQAIAALQHQLGRQPSEGEI
AEAMKIPLADYQSMLGDARGHQLLYFEDFGESDEDDSFLDKQSADEATMPLPQLLDANLR
ACIIAGIENLPEREQLLMSLYYEQELNLREIAEVFGVSESRICQLHGQAIARLRARLKED
SWIAAA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgcaagcggcaagaccgcgaagagcgaaaaaaacgatctgctcgagcagtac
atgccgatggtcaagcggctcgcgcaccacatgatgggccggctgccgcccagcgtcgag
gaggacgatcttgtccaggccggcatgatcggcctgctcgacgccgtcagccgttacgac
gaggcgcagagcgcgcagttcgaggcctacgcgatccagcgcatccgcggttcgatgatc
gacgagttgcggcagtcggactggatgccgcgcagcgctcggcaatcgatgcgcaagatc
gagcaggccatcgccgcgctgcagcaccagttggggcgtcagccgagcgagggcgaaatc
gccgaggcgatgaagatcccgctcgccgactaccagtcgatgcttggcgatgcgcgcggc
caccagttgctttacttcgaggatttcggcgagtccgacgaggacgactccttcctcgac
aagcagtccgccgacgaggcgactatgccgctgccgcagctgctcgacgccaacctcagg
gcctgcatcatcgccggcatcgagaacctgcccgagcgcgagcagctcctgatgtcgctg
tattacgaacaggaactcaacctgcgcgagatcgccgaggtcttcggcgtcagcgagtcg
cgcatctgccagctgcacggccaggcgattgcgcggctgcgcgcccggctcaaggaagat
tcgtggatcgcagcagcctga
DBGET
integrated database retrieval system
