Thiobacillus denitrificans: Tbd_1456
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Entry
Tbd_1456 CDS
T00275
Name
(GenBank) Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Organism
tbd
Thiobacillus denitrificans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_3
PAS
dCache_1
PAS_9
HAMP
PAS_8
HAMP_PhoQ
GAF_2
PAS_10
PAS_12
Motif
Other DBs
NCBI-ProteinID:
AAZ97409
UniProt:
Q3SIW6
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Position
1539712..1543350
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AA seq
1212 aa
AA seq
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MTNLPISTRLLLSYLLVAVLPLAGLAAFYLASFEASLTQTVLANMASVADKKAAQIDSYL
RERSEDVAQLALRPAVRNGLLELTRAFRAGGPAAPAYLDATLQLRRALEDGGAASGFYDL
LLVDAEGNVLFTLKREPDLLSNLRHGPYRDTELAAGYARAMRSGKPLLTRFAPYAPSDNR
PTAFYVTPLRIDGEVHGALALQLDVQRLMTVTVDRIGLGRTGETVLAQRDGDEAYYTGPL
RHVRDAAYRYRVPLKQGAAPMIAALAGRNGDGVVRDYAGIETVAAWRHLPALDWGMVVKI
DADEALAPAHHLRQLTYVALALFLLLSAATAFLLGRRFARPIRAMTRVADQIAAGDLRQR
VPQDGGDELGRLAAAFNRMADTLAASYDNLEAEVEKRSRELRELSALQGAILEHAGALVV
VLDREGRIRRFNRACEALTQYSFSEVEGRQVWDFIPPEERRIVQDEAFAVLFNDPEQSRS
TLTNHWVARDGGRRLIEWSNSVLHDAQGKVEFVVAVGNDVTDKMRAEAALKESESRLKEA
QRIAQVGSWALDLVTGKLIWSDEMFRIFETDEAAFGQSYEAFLDALHPEDREHVNKAYMH
SVTNHTPYDLVHRLLLPDGRVKWLHGRGETRYGKNGDPIASCGTVQDITARKKQEDALRL
YASIFEHSGEAILIADQARHIIAVNPAFTNLTGYALDDIRGEEPTILAGGQASEESYRST
WASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVLTHYVASFTDITERKLAEAQI
KHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQ
LLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGH
ALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFD
HDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLIL
PLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLC
LEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVC
EIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAE
RALAYIREQQAA
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaatcttccgatctcgactcgactgctgttgagctacctcctcgtcgccgtgctg
ccgcttgccggcctcgcggcgttctatctcgcctcgttcgaggcctcgctgacgcaaacc
gtgctcgcgaacatggcgagcgtcgccgacaagaaagccgcgcagatcgacagctacctg
cgcgagcgctcggaggacgtcgcccagctcgccctgcgccccgcggtccgcaacgggttg
ctcgaactcacgcgcgcgtttcgcgcgggcggccccgctgcgccggcctatctcgacgcc
acgcttcaactgcggcgggcgctcgaagatggcggagccgcgtcgggtttctacgacctg
ctgctggtcgacgccgaaggcaacgtgctgttcacgctcaagcgcgagcccgacctgctc
tcgaatttgcgccacggcccctaccgcgacaccgaactcgcagcgggatacgcgcgcgcg
atgcggagcggcaagccgctgctcacgcgctttgcgccctacgcgccatccgacaaccgc
ccgacggcgttttacgtgacgcccctgcgcatcgacggcgaggtccacggcgcgctcgcc
ttgcagctcgacgtgcagcgcctcatgacggtcacggtcgaccgcatcggcctcggacgc
actggcgaaacggttctggcgcaacgcgacggggacgaggcgtattacaccggcccgctg
cgccacgtgcgtgacgccgcctaccgctatcgcgtgccgctcaagcagggggctgccccg
atgatcgcggcgctcgccggcaggaatggcgacggggtcgtgcgcgactacgccgggatc
gagacggtcgcggcgtggcgtcatcttccggccctggactggggcatggtcgtgaaaatc
gacgccgacgaggcgctcgcgcccgcgcaccatttgcgccagctgacctacgtggcgctc
gcgctgtttctactgctctcggctgcaaccgcctttttgctcggccgccgcttcgcccgc
ccgattcgcgcgatgacgcgcgtcgcggaccagatcgccgccggcgatctgcgtcagcgc
gtgccgcaggacggaggcgacgaactcggacgtctggccgctgcattcaatcgcatggcc
gacacgctggcggcgtcctatgacaacctcgaagccgaggtggaaaaacgctcgcgcgaa
ttgcgcgaactttccgcgctgcagggcgcgatcctcgagcacgcgggggcgctggtcgtg
gtcctcgaccgcgagggccgcatccgccgcttcaaccgtgcgtgcgaggctttgacgcag
tattcgttttccgaggtcgaaggccgccaggtatgggatttcatcccgcccgaggaacga
cggatcgtgcaggacgaggcgtttgcggtcctcttcaacgatccggagcagtcccggagc
acgctcaccaatcactgggtcgcgcgcgacggaggtcgccgtctgatcgaatggtccaat
tccgtgttgcacgacgcgcagggcaaagtcgaattcgtcgtcgccgtgggcaacgacgtc
accgataaaatgcgggccgaagccgcgctcaaggaaagcgagagccggctcaaagaggcg
cagcgtatcgcccaggtcggcagctgggcgctcgatctcgtcacgggtaaattgatctgg
tcggacgagatgtttcgcattttcgaaaccgacgaggcggcgttcggccagtcgtacgag
gccttcctcgatgcactccatccggaagaccgggagcacgtgaacaaggcctacatgcat
tcggtcaccaaccacacgccctatgacctcgtccaccggcttcttctgccggacggccgg
gtcaaatggctgcatgggcgcggcgagacacgctacggcaagaacggcgatccgatcgct
tcctgcggtaccgtgcaggacatcacggcccgcaagaagcaggaagacgcgctgcggctc
tacgcgagcattttcgagcacagcggcgaagcgatcctgatcgccgaccaggcgcgccac
atcatcgcggtgaaccctgcgttcaccaacctgacgggctatgcgctcgacgacatccgc
ggcgaggaaccgaccattcttgccggggggcaagcgtccgaagagagctatcgcagcacc
tgggcgtcgctcgagcaaactggctattggcagggcgaaatcatcgaccgccgcaaggac
gggacgctctatccgaagtggatggcggtatcggtcgtgcgcgatgcggacggcgtcctc
acccattacgtcgcgagtttcaccgacatcaccgagcgcaagctcgcagaggcacagatc
aaacatctcgcctatcacgacccgctcaccgggctcagcaaccgcttcagccttcagacg
caactcgaccagaccctcgcgctggcgcgtcgcgaacagcgcaccctggcggtcgtcttc
ctcgacctcgaccgcttcaagtcgatcaacgatagcctcggtcacgcgctcggcgaccag
ttgctcgtcgaggtcgcccgtcgtctgcgcgacaacgtacgcgacagcgacatcgtcgca
cgcctcggcggcgacgagttcgtcgtcgtgctgaccgaagtgggcgacgcagcaggcgcg
gcgcgcgtggccgacaagctgctgggcgcgctggttccgcgctaccggatcggcgggcac
gcgctgcacaccaccgcgagcatcgggatctcgctctatccgcacgacggcgacgacgct
gacgctttgatgaagaacgccgataccgcgatgtatcacgccaaatcgcaaggtcgcgac
aacgtgcagttctttacgcccgagatgaatcagtcggtgctcaaacgcctgcagttcgac
cacgatcttcgggtggccgtcgaagcaggccagttcgaattgcattaccagccgcagatc
aacagcacgagcggccgggtcgtgaaggtcgaagcgctggttcgctggcagcacccgcgc
gagggcttggtgtcgccggcagaattcattccgatcgccgaggagacaggactgattctg
ccgcttggtgagtgggtgctcaacgaggcctgtcgccaactcaggctctggcgcgacgcg
ggtatcaccgacctgaccgtcgcggtcaatctttcggcgcatcagttgcactcgcccgcc
ctgattcccatggtcgcgcgcacactcggcaaccacggactcgagggcgccgacctctgt
ctcgaaatcaccgagtcggtcgccatgcgcgacacgacggcaagcatcgcgcaactccag
gcgctgcgcgacctcggcattcatctgtcaatcgacgacttcggcacaggctactcgtcg
ttgagttacctcaagctgctgccgatagacacgctgaaactcgatcagtccttcgtgtgc
gagatcgagttcaaccccagcgacgtcgcgatctgtgcggcgacgatcgcgctcgcgcac
agtctcggtctcgaggtcgtcgccgaaggtatcgagaccgagacccagcgcaggctgctc
gcctcgcatcgctgcgacttcatgcagggctatctgttcagcgcgccgctgccggcagag
cgcgcgcttgcctacatacgcgagcagcaggccgcgtga
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