Thiobacillus denitrificans: Tbd_1533
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Entry
Tbd_1533 CDS
T00275
Name
(GenBank) host factor Hfq protein
KO
K03666
host factor-I protein
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd02024
Quorum sensing
tbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tbd_1533
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Tbd_1533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbd03019
]
Tbd_1533
03036 Chromosome and associated proteins [BR:
tbd03036
]
Tbd_1533
Messenger RNA biogenesis [BR:
tbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Tbd_1533
Chromosome and associated proteins [BR:
tbd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Tbd_1533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
AAZ97486
UniProt:
Q3SIN9
LinkDB
All DBs
Position
1618264..1618506
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AA seq
80 aa
AA seq
DB search
MAKEHNHLQDVFLNTLRKERIPVSVFLVNGIKLMGRIESFDQFVVLLKGQDQAAQMIFKH
AISTISPSREVVLPQRDAEA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaacacaatcatctgcaagacgtttttctcaacaccctgcgcaaggaacgc
atcccggtctcggtgttcctcgtcaacgggatcaagctgatggggcggatcgagtctttc
gatcagttcgtcgtgctgctcaagggccaggaccaggccgcacagatgattttcaagcac
gccatctcgacgatttcgccgtcgcgcgaagtcgtgctgccgcagcgcgacgccgaagcc
tga
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