Thiobacillus denitrificans: Tbd_1666
Help
Entry
Tbd_1666 CDS
T00275
Name
(GenBank) peptidoglycan-binding protein LysM
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tbd01011
]
Tbd_1666
Enzymes [BR:
tbd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Tbd_1666
Peptidoglycan biosynthesis and degradation proteins [BR:
tbd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Tbd_1666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AAZ97619
UniProt:
Q3SIA9
LinkDB
All DBs
Position
1749531..1751036
Genome browser
AA seq
501 aa
AA seq
DB search
MPGIKFTRIGAARLPLGRLGLAALMFWASHHSLATEPRQGIHTLEWNGGSDNVPAADEVP
AIALEAGTRDVWQRVRDGFRIDDQAAPNPLIAVHESWYAARPEHVRRVVERARRYLFYIV
EEVERRGMPMEIALLPMIESAFDPGALSPSAASGIWQFIPSTGRLYGLRQDKWYDGRLDF
TAATGAALDYLGKLYLDFGDWQLALAAYNCGEGCVGRAIQRNVQQGLPTDYASLALPNET
RHYVPKLLAIRNLVRNPEQYGMTIDGLPNEPYFNLVSVSASMDLHSAARLAGMTIEEFVA
LNAAFPRKLIRSDTPVSLLVPVDRADRFQRNLDAGDWDSWQPYAARKGERPEEIARRFKV
SVARLAEHNQFKLRRGRLARAQTVLVPVKRRDTGIAANQSGSRRPAPTEHEVKAGETLYG
VARRYGLSARELADANPGVGARLRPGQVLQLAIPVSSPRETAPLRPRKTGARGAALPSHY
APNRGDTLLTIARRFDISMVR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggaatcaaattcacccgtatcggtgcagcgcgcctccctctcggccggctcgga
ttggcggccctgatgttctgggcaagccatcacagcctggcgacggaaccccgacaaggc
atccacacactcgaatggaacggcggcagtgataacgtgcccgctgccgacgaggtgccc
gcgatcgcccttgaagctggcacgcgcgacgtctggcagcgtgtccgcgacggtttccgc
atcgacgaccaggcggcgccgaacccgctcatcgctgttcacgaatcctggtacgcagcc
cggcccgaacacgtgcgtcgcgtcgtcgagcgcgcgcgccgctatcttttctatatcgtc
gaagaggtcgagcggcgcggcatgccgatggaaatcgcgctgctgcccatgatcgagagc
gcgttcgaccccggcgcgctctcgccctccgcggcgtccggaatctggcagttcattcct
tccaccggacgtctgtacggcctcaggcaggacaaatggtacgacggccgcctcgatttc
accgccgcgaccggggccgcactggactacctcggcaagctctatctcgacttcggtgac
tggcaactcgcgctcgcggcgtacaactgcggcgaaggctgcgtcggtcgcgcgatccag
cggaacgtccagcaaggccttccaaccgactacgcaagcctcgcgctgccgaacgagacg
cgtcactacgtccccaagctgctcgcgatccgcaacctggtgcgcaatcccgagcaatac
ggcatgacgatagacgggcttccaaacgagccttatttcaacctggtgagcgtgagcgcc
agcatggatctgcattcggccgcgcggctggcgggcatgaccatcgaggagttcgtcgcg
ctcaacgcggcctttccgcgcaagctgatccgctccgacacgccggtcagcctgctcgtt
ccggtcgaccgcgccgaccgtttccagcgcaatctggatgccggcgactgggacagttgg
caaccctacgccgcacgcaagggcgagcggcccgaggagatcgcgcgccgcttcaaggtc
agcgtggcacgactcgccgaacacaaccagttcaagctcagacgcggcaggctggcacgc
gcacagaccgtgctggtgccggtcaaacgtcgtgacaccggtatcgccgcgaaccagtcg
ggcagtcgtcgtcctgcgccgaccgaacacgaagtcaaggctggcgagacgctctacggc
gtcgcgcggcgctacggcttgagcgcccgcgaattggcggacgccaatccgggggtcggg
gcaagactcaggccggggcaggtcctgcaactggcaatcccggtttcttcgccgcgcgag
acggccccattgcgaccgcgcaagacgggcgctcggggtgccgccctgccgtcacactac
gccccgaaccgcggcgacacgcttctcacgatcgcccgccgcttcgatatcagcatggtc
aggtga
DBGET
integrated database retrieval system
