Thiobacillus denitrificans: Tbd_1839
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Entry
Tbd_1839 CDS
T00275
Name
(GenBank) Exonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Tbd_1839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbd03019
]
Tbd_1839
03009 Ribosome biogenesis [BR:
tbd03009
]
Tbd_1839
Messenger RNA biogenesis [BR:
tbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tbd_1839
Ribosome biogenesis [BR:
tbd03009
]
Eukaryotic type
Pre-60S particles
RNases
Tbd_1839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AAZ97792
UniProt:
Q3SHU1
LinkDB
All DBs
Position
complement(1937558..1938106)
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AA seq
182 aa
AA seq
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MALNPTHLLWLDMEMTGLSPESDRIIELAIVVTDADLNTVAEGPVLVVHQPDAVMDAMDS
WNRGTHGKSGLIDRVKASQLSESDAEAQMLEFVKQHVSPRTSPMCGNSICQDRRFMARHM
PELEAFFHYRNLDVSTLKELAKRWRPGLCDAFKKSNKHEALADIYESIDELRYYREHFIR
AE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaaccccacgcatctgctctggctcgacatggaaatgaccggcctgtcgccc
gagagcgaccgcatcatcgaacttgcgatcgtcgtgaccgacgccgacctcaataccgtc
gccgaggggccggtgctggtcgtgcatcagcccgacgcggtgatggacgcgatggacagc
tggaacaggggcacccacggcaagtcggggctgatcgatcgcgtcaaggcgtcgcagctc
agcgagtccgatgccgaggcgcagatgctcgaattcgtcaaacagcacgtctcaccgcgg
acctcgccgatgtgcggcaactcgatctgtcaggatcggcgcttcatggcgcgccacatg
cccgagctcgaagccttcttccactatcgcaacctcgacgtcagcacgctcaaggagctc
gccaagcgctggcgcccgggcctctgcgacgcgttcaagaaatcgaacaagcacgaggcg
cttgccgacatctacgaatccatcgacgagctcaggtactaccgcgagcacttcattcgc
gccgagtaa
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