Thiobacillus denitrificans: Tbd_1916
Help
Entry
Tbd_1916 CDS
T00275
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tbd
Thiobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbd03016
]
Tbd_1916
Enzymes [BR:
tbd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Tbd_1916
Transfer RNA biogenesis [BR:
tbd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tbd_1916
Prokaryotic type
Tbd_1916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CATSPERE_NTD1
K_channel_TID
Motif
Other DBs
NCBI-ProteinID:
AAZ97869
UniProt:
Q3SHL7
LinkDB
All DBs
Position
complement(2011555..2012337)
Genome browser
AA seq
260 aa
AA seq
DB search
MMRIAVGLEYRGVGFCGWQSQPQACGVQDAVEKAVSAIAGEAITVTAAGRTDTGVHAALQ
IVHFDTTSVRPLTAWVRGVNSHLPAGVAVLWAREVDAEFHARFAAFERGYRYVLLNHPVR
PGLNAGLVGWHHRPLDVACMNRAASPLIGRHDFSAFRAAECQARSPVKELRRALIERRGD
YLLCDFRADGFLHHMVRNLMGCLVQIGAGGRPPEWLHEVLAGRDRTRAAPTFEAAGLYLT
HIRYPARFALPESSERWPFA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggatcgcggtgggtctcgaatatcgtggcgtcggtttctgcggctggcagtcg
cagccgcaagcctgcggcgtccaggacgccgtggaaaaagccgtgtcggcgatcgccggc
gaggcgatcacggtcaccgccgccggccgcaccgacaccggcgtgcatgcggccttgcag
atcgtgcacttcgacacgacctcggtccgcccgctgaccgcgtgggtgcgcggcgtcaac
agccatcttcccgcgggcgtcgccgtgttgtgggcgcgcgaagtcgatgcggaattccat
gcacggtttgccgctttcgagcgcggctatcgctacgtgctgctcaaccatccggtgcgc
cccggcctcaacgccgggctcgtcggctggcatcaccggccgctcgacgtggcgtgcatg
aatcgggcggcgtcgccgttgatcggacggcacgacttttccgcgttccgcgcagccgag
tgccaggcccgctcgccggtcaaggagttgcgccgcgcgctgatcgagcggcgcggcgat
tacctgctgtgcgatttccgcgcggacggttttctgcaccacatggtgcgaaacctcatg
ggctgtctggtccagatcggtgccggcggccgcccgcccgagtggctgcacgaggtgctg
gccgggcgcgaccgcacgcgtgccgcgccgaccttcgaggcggcaggactgtacctcacg
cacatccggtatcctgcgcgctttgccctgccggaaagctccgaacgatggccgttcgcg
taa
DBGET
integrated database retrieval system
