Thiobacillus denitrificans: Tbd_2086
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Entry
Tbd_2086 CDS
T00275
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Tbd_2086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbd03019
]
Tbd_2086
03009 Ribosome biogenesis [BR:
tbd03009
]
Tbd_2086
03036 Chromosome and associated proteins [BR:
tbd03036
]
Tbd_2086
Enzymes [BR:
tbd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Tbd_2086
Messenger RNA biogenesis [BR:
tbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tbd_2086
Ribosome biogenesis [BR:
tbd03009
]
Eukaryotic type
90S particles
RNase
Tbd_2086
Prokaryotic type
rRNA processing factors
Tbd_2086
Chromosome and associated proteins [BR:
tbd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Tbd_2086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AAZ98039
UniProt:
Q3SH50
LinkDB
All DBs
Position
complement(2178804..2179484)
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AA seq
226 aa
AA seq
DB search
MNNALLDARLQQALGYTFSRSGLLQQALTHRSYGALNNERLEFLGDSVLNCSVARALYDA
FPDLPEGSLSRLRANLVRQETLAEIAGALRLGDSLRLGEGELKSGGFRRPSILADALESL
FGAVFLDAGFDEAQRVVRRLFDPLVAQIDPKASGKDPKTRLQEILQSRRLPLPEYRLVGT
EGEAHDQSFIVECLLAKPVLSTRGTGKSRRAAEQEAARQACAELQR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ttgaataacgccttgctcgacgcgcgcctgcagcaggcgctcggctacaccttctcgcgt
tcgggcctcctgcagcaggcactgacgcatcgcagctacggtgcgctcaacaacgagcgg
ctcgagtttctcggcgactcggtgctcaactgcagcgtcgcgcgcgcgctttacgacgcc
ttcccggacctgcctgaaggcagcctgtcgcggctgcgcgcgaacctcgtgcgccaggaa
acgcttgccgagatcgcgggcgcgctgcggctcggcgactcgctccggctcggcgagggc
gaactcaagagcggcggcttccgccgcccgtccatcctcgccgacgcgctcgaatcgctg
ttcggcgcggtgttcctcgatgccggtttcgacgaggcgcagcgcgtcgtgcggcggctg
ttcgatccgctcgtcgcgcagatcgaccccaaggcctcgggcaaggacccgaagacgcgg
ctgcaggaaattctccagtcccgccggctgccgctgcccgaataccgcctcgtcggtacc
gaaggcgaggcgcacgaccagagcttcatcgtcgaatgcctgctcgccaagccggtgttg
agcacgcgcggcaccggcaagagccgccgtgccgcggaacaggaggcggcgcgccaggcc
tgcgccgaattgcagcgatga
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integrated database retrieval system
