Thiobacillus denitrificans: Tbd_2246
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Entry
Tbd_2246 CDS
T00275
Name
(GenBank) putative Ku-like DNA-end-binding protein
KO
K10979
DNA end-binding protein Ku
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Tbd_2246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbd03400
]
Tbd_2246
DNA repair and recombination proteins [BR:
tbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Tbd_2246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AAZ98199
UniProt:
Q3SGP8
LinkDB
All DBs
Position
2320776..2321675
Genome browser
AA seq
299 aa
AA seq
DB search
MATSPRTLWKGAISFGLVHIPIALYTATTEQGLDFDWLDKRSMDPVGYKRVNKRTGKEIS
RENIVKGIEYEDGRYVVLSPEEIAAAYPKTTQTIEIETFAPAADIPFIYLDRPYYVAPIN
KGAKVYALLREILRKTGKVGIARVVIQSKQHLAALMPYGPVMVLNLLRWGDKIRGYDALD
LPAEGIKAAGVSDKEMRIGEQLVEDMSAPWDPAATRDSFKEQILQLVEAKAQAGKLESVA
PIEAREHEPAGATIYDLTELLQRSLSKAKQDKQPSARATPKARAGAKTPTKSGGKRKAA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagcccacgaacgctctggaaaggcgccatcagtttcggcctggtacacatt
ccgatcgccctctacaccgcgaccaccgagcagggactcgacttcgactggctcgacaag
cgcagcatggatccggtcggctacaagcgcgtcaacaagcgcaccggcaaggagatttcg
cgcgagaacatcgtcaagggcatcgagtacgaggacggccgctacgtcgtgctgtcgccc
gaagagattgccgcagcctacccgaagacgacgcagacgatagagatcgagaccttcgcg
ccggccgcggacatccccttcatctacctcgatcgaccctactacgtcgcgccgatcaac
aagggcgcgaaggtctacgccctgctgcgcgagatcctgcgcaagaccggcaaggtgggc
atcgcgcgcgtcgtcatccagagcaagcagcatctcgcggcgctgatgccctatggcccg
gtcatggtcctcaacctgctgcgctggggcgacaagatacgcggctacgacgccctcgat
ctgccggcggaaggcatcaaggcggccggcgtgagcgacaaggaaatgcgcatcggtgag
cagctcgtcgaggacatgagcgccccctgggatccggccgcgacccgcgactcgttcaag
gagcagatcctgcagctcgtcgaggcgaaggcacaagccggcaaactcgaatcggtcgcg
ccgatcgaagcgcgcgagcacgaaccggccggcgccacgatctacgacctcaccgaactg
ctgcagcgcagcctgagcaaggcgaagcaggacaaacagccttcggcgcgcgccacgccc
aaggcccgcgcgggtgcgaagacgccgaccaagtcgggcggcaagcgcaaggccgcgtaa
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