KEGG   Thiobacillus denitrificans: Tbd_2373
Entry
Tbd_2373          CDS       T00275                                 
Name
(GenBank) Signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tbd  Thiobacillus denitrificans
Pathway
tbd02024  Quorum sensing
tbd03060  Protein export
tbd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tbd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Tbd_2373
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Tbd_2373
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Tbd_2373
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tbd02044]
    Tbd_2373
Enzymes [BR:tbd01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Tbd_2373
Secretion system [BR:tbd02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Tbd_2373
  Eukaryotic Sec-SRP protein
   Tbd_2373
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin AAA_31 ArsA_ATPase AAA_16 ParA APS_kinase TPP_enzyme_M ABC_tran GTP_EFTU AAA_33 AAA_18 Helicase_RecD AAA_30 nSTAND3 KTI12 6PF2K AAA_24 DO-GTPase1 AAA_5 MshEN VirC1 Mg_chelatase
Other DBs
NCBI-ProteinID: AAZ98326
UniProt: Q3SGC4
LinkDB
Position
2448001..2449344
AA seq 447 aa
MFENLSGRLAGVVKNLRGQARITEANIQDTLRQVRLALLEADVALPVVKSFIDAVKARAL
GQEVLTSLSPGQALIGIVHEELTRLMGGENADLNLAATPPAVILMAGLQGSGKTTTSGKL
ALLLKNRKKKVLLASADVYRPAAIDQLRQLAKQLDVSFFDADSERDPLKIARAAQDHARK
QFYDVLIVDTAGRLAIDEAMMNEIKALHAAITPVETLFVVDAMQGQDAVNVARAFNEALP
LTGVVLTKLDGDARGGAALSVRQITGKPLKFIGVGEKPNGLEPFHPERMAQRILGMGDVL
SLIEQAQSSVDLAEAKKIADKVKKGKDFDLEDFKAQIQQMRKMGGLSALMDKLPGAGQMA
VPAGADDKAVNRIEGIINSMTPLERRKPDIIKASRKRRIAAGAGVQVQEVNKLLNQFGQA
QKMMKMMGKGGIGKMMRGMKGMLPGMR
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgttcgaaaacctcagtggacgcctcgccggcgtcgtcaagaacctgcgcggacaggct
cgcatcaccgaagccaatattcaggataccttgcggcaggtgcggctcgcgctgctcgag
gcagacgtcgcgctgcccgtcgtcaagagcttcatcgacgcggtgaaggcgcgagcgctg
ggccaggaggtactcaccagcctgtcgcccggacaagccctgatcggcatcgtccacgaa
gagctcacccggctcatgggcggcgagaacgccgacctgaatctcgcggcgacgccgccc
gccgttatcctgatggccggcctgcagggctcgggcaagacgaccacgagtggcaaactc
gcgctgctcctgaaaaaccgcaagaagaaagtactgctcgcctcggccgacgtctaccgg
cccgccgcgatcgaccagctgcgacagctcgcgaaacagctcgacgtcagcttcttcgac
gccgatagcgagcgcgacccgctgaaaatcgcgcgcgccgcgcaggatcacgcgcgcaag
cagttctacgacgtgctgatcgtcgataccgcaggccgtctcgcgatcgacgaggccatg
atgaacgagatcaaggcgctgcacgccgccatcacgcccgtcgaaacgctgttcgtggtc
gatgcgatgcagggccaggacgccgtcaacgtggcgcgcgccttcaacgaagcgctgccg
ctcaccggcgtcgtcctgaccaagctcgacggcgacgcgcgcggcggcgcggcgctttcg
gtccgacagatcaccggcaagccgctgaagttcatcggcgtcggcgaaaaacccaacggc
ctcgagcccttccatcccgaaaggatggcgcaacgcattctcggcatgggggacgtgctg
tcgctgatcgagcaggcgcaaagttcggtcgacctggccgaggcaaagaaaatcgccgac
aaggtcaagaaaggcaaggacttcgacctcgaggacttcaaggcgcagatccagcagatg
cgcaagatgggcgggctgtcagcgctgatggacaagcttccgggcgccggccagatggcg
gtcccggccggcgccgacgacaaggccgtgaatcgcatcgaaggcatcatcaacagcatg
acgccgctcgagcgtcgcaaacccgacatcatcaaggcgagccgcaagcgccgcatcgcc
gccggggccggcgtgcaggtgcaggaggtcaacaaactgctgaaccagttcggccaggcg
cagaagatgatgaaaatgatgggcaagggcggcatcggcaagatgatgcgcggcatgaaa
ggcatgctccccgggatgcgctga

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