Thiobacillus denitrificans: Tbd_2507
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Entry
Tbd_2507 CDS
T00275
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tbd
Thiobacillus denitrificans
Pathway
tbd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tbd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Tbd_2507
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbd02000
]
Tbd_2507
Enzymes [BR:
tbd01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Tbd_2507
Transporters [BR:
tbd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Tbd_2507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA
AAA_16
DEAD
AAA_22
HUTI_composite_bact
NACHT
AAA_25
AAA_24
AAA_29
DUF3584
ABC_ATPase
RsgA_GTPase
nSTAND3
Zeta_toxin
AAA_28
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
AAZ98460
UniProt:
Q3SFZ6
LinkDB
All DBs
Position
2579895..2581634
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AA seq
579 aa
AA seq
DB search
MSAPTSRHLYGRLLGYVKPHWRMFALSIVGLILTAATEPMLPALFKPLLDEGFVAKDQDF
IRWVPLLLLGLFVLRGVASFISTYSMAWVGSRLVMDLRAAMFDKLMALPTRYFDQNPSGQ
LIAQLAFNVTQVTQSATSSLTTLVRDTVTVLGLLGYLVWLNWRLTLIVFALVPLTLWVVR
VASKRLRGLSRKAQENIGDLTQVVDEAVGGHRVVKLYGGETYEQARFHRAANLARQFEMK
RVAANAVYEPVIQFIAAIALAIIVFIAAGQASANTTTVGGFVAFFMAMLLLFAPLKRLTA
VNDQLQRGLAASETIFALLDQDAERDTGTREPAHIEGRLAFRDVGLTYPGKQTPALARIS
LDIAPGETVALVGASGSGKTTLANLVPRFYDPDAGRIELDGVDIRDVKLQSLRGHIALVS
QDVVLFNDTLAHNIAYGSKREASPDEIRAACVAAHAWDFIQAMPDGLDTLIGENGMRLSG
GQRQRIAIARAILKNAPILILDEATSALDSESERHVQAALETLMQNRTTLVIAHRLSTIE
RANRIVVLEGGRIVETGAHADLLAKQGRYAQLHALQFSQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgccgactagccgtcatctctacgggcgcctgctcggctacgtgaagccgcac
tggcgcatgttcgcgctctcgattgtcggcctgatcctcaccgccgcgaccgagccgatg
ctgccggcgctgttcaaaccgctgctggacgagggcttcgtcgccaaggaccaggacttc
atccgctgggtgccgctcttgctgctgggcctgttcgtcctgaggggggtcgcgagcttc
atcagcacctacagcatggcctgggtcggcagtcgcctcgtgatggacctgcgcgcggcg
atgttcgacaagctgatggcgttgccgacgcgttacttcgaccagaaccccagcggccag
ctgattgcgcagctcgcgttcaacgtcacccaggtcacgcagtcggcgacgagttcgctg
acgacgctcgtgcgcgacacggtcaccgttctggggctgctcggctatctcgtgtggctc
aactggcggctcacgctgatcgtgttcgcgctcgtgccgctgaccttgtgggtcgtgcgc
gtcgcgagcaagcgcctgcgcggcctctcgcgcaaggcgcaggagaacatcggtgacctc
acgcaggtggtcgacgaggccgtcggcggccatcgcgtggtcaagctctatggcggcgaa
acctacgagcaggcgcgtttccatcgcgcggcgaacctcgcgcgccagttcgagatgaag
cgcgtcgcggccaacgcggtgtacgagccggtgatccagttcatcgccgccatcgcgctt
gcgatcatcgtgttcatcgcggccgggcaggcgagtgcgaacacgacgacggtcggcggc
ttcgtcgccttcttcatggcaatgctgctgctgttcgcgccgctcaagcgcctgaccgcg
gtcaacgaccagctgcagcgcggcctcgcggcgtcggagacgatcttcgcgctgctcgac
caggacgccgagcgcgacaccggcacccgcgaaccggcgcacatcgaaggccgcctcgcg
ttccgtgacgtgggcctgacctaccccggcaagcagacgcctgcactcgcgcgcatttca
ctcgacatcgcgccgggcgaaacggtcgcactcgtcggtgcgtcgggttcgggcaagacg
acgttggcgaacctcgtgccgcgtttctacgacccggatgctgggaggatcgagctcgac
ggcgtcgacatccgcgacgtcaagctgcaaagcctgcgcggccacatcgcgctggtgtcg
caggacgtcgtgctgttcaacgacacgctcgcgcacaacatcgcctacggcagcaagcgc
gaggcgagccccgacgagatccgcgcggcctgcgtcgcggcgcatgcctgggatttcatc
caggcgatgcccgacggcctcgacacgttgatcggtgagaacggcatgcgcctgtcgggt
ggccagcgccaacgaatcgccatcgcgcgcgcgatcctcaagaacgcgccgatcctgatt
ctcgacgaagcgacctcggcgctcgacagcgagtccgaacgccacgtccaagcagcactc
gagacgctcatgcaaaaccgcacgacgctcgtcatcgcgcaccggctgtcgaccatcgag
cgcgcgaaccgcatcgtcgtactcgaaggcggacgcatcgtggaaaccggcgcccacgcc
gacctgctcgcgaagcagggccgctacgcgcaactccacgcgctgcagttttcgcaatga
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