Treponema brennaborense: Trebr_0248
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Entry
Trebr_0248 CDS
T01489
Name
(GenBank) Diaminopimelate epimerase
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
tbe
Treponema brennaborense
Pathway
tbe00220
Arginine biosynthesis
tbe00240
Pyrimidine metabolism
tbe00250
Alanine, aspartate and glutamate metabolism
tbe01100
Metabolic pathways
tbe01110
Biosynthesis of secondary metabolites
tbe01240
Biosynthesis of cofactors
Module
tbe_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Trebr_0248
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Trebr_0248
00220 Arginine biosynthesis
Trebr_0248
Enzymes [BR:
tbe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Trebr_0248
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
DAP_epimerase
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
GARS_A
ATP-grasp
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AEE15697
UniProt:
F4LMD5
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All DBs
Position
276975..281267
Genome browser
AA seq
1430 aa
AA seq
DB search
MPLNANIHKVMVIGSGPIVIGQAAEFDYAGTQACKALKEQGLKVVLVNSNPATLMTDHTM
ADAIYIEPLIPETIKRIIEKEKPDSLLSTLGGQTGLTLSMQLAKEGFLAEHGVQLLGARP
DTIDKAEDRQLFKDTMQEIGEPCIPSKVVTDLQSALDFTDEIGYPVIVRPAFTLGGTGGG
IAYSEEELREIAQNGLHRSPIHQILVEKCISGWKEIEFEVIRDGSGNVITVCSMENFDPV
GVHTGDSIVIAPTVTLADKEYQMLRSAALNIISALKIEGGCNCQFALKPDSFEYAVIEVN
PRVSRSSALASKATGYPIAKVAALIAIGYNLDEIPNAVTKKTAACFEPVLDYVVVKFPKW
PFDKFVYAKRTLGTQMKATGEVMAIGTTFEQALMKAVRGAEISVSSCRLPLFTRESNEQI
VRRVGECTDQRLFAIYEAMTRGLLSVEKIHEITKIDIWFLAKLRNLVAMDAELQAVKDGN
AGLSPESYLKAKKLGYPDKVIQELSGVHIPGAAGVLAETEAAASARAAGLPAHLPAKYKM
VDTCAGEFNAETPYFYAGYDTENEAETFLSAQEKKLAESGTESKGRILVLGSGPIRIGQG
IEFDYASVQCVWALKRLGYEVAIVNNNPETVSTDFDTADRLYFEPLTPEDVMNIIRTERP
LGVVVAFGGQTAIKLTKFLHDQGITILGTSADSIDMAEDRERFDELLERLNIKRPKGFSV
LTTEEAVSAAEKLTYPVLLRPSYVLGGQNMIIAFTEADIREYMAIILAQNIENPVLIDKY
LMGIELEVDAICDGEDILIPGIMEHIERTGIHSGDSIAVYPAWNLNDILTEKIINQSREL
ALALGTKGLVNIQYLIYDNELYIIEVNPRSSRTIPYISKVTGVPMVELAVRAMLGGKLTD
MGYGTGLYRIPPYVAVKVPVFSFEKLIDVDTHLGPEMKSTGEVLGIARTLDEALYKGLIA
AGYRMKKTGGVLITVRKTDQFEIVDTARKYYDLGFKLYATEGTAKVIGDFGMDVQVVNKI
HENHSDNILTLLDTGKIDYVISTSAKGRLPTYDSVKLRRKTVERDIPCLTSIDTANAIAN
SLLSRYSPESLELVNINALSNAKIRLDFAKMQSTGNDFIVFNAMEQEIINPEGLSVRLCD
RRTGIGADSLVLITKSAVADAGMRFFNRDGSEGNMAGNAICCVAKYLYDNDINGIAARAA
SAVGTHFTAEITVETASGVKRLLAYTQSGKVSSVRVDMGKPEFDPAKIPAKLAASGVTGT
PDGISIIGGAAVPSYPCSAENVASGKLPEKAVVHAELSAAGESYRAAVLAVGTPHCVLFS
SFVDKIDVPGVGPLFENNPAFPRRINTEFVRVAGRNSLKMRVWERGNGETPACGTGACAA
AVAAVLNGFCPLDENITVKVRGGDLIVNYTGDTVYLTGGAALVYTGEIEI
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgaatgctaatatacacaaggttatggtgataggttccgggccgatcgttatc
ggtcaggctgccgaattcgattacgcgggaacgcaggcgtgcaaagcgctcaaggagcag
ggacttaaagtggtgcttgtgaactcgaatcccgccacgctcatgaccgatcacacgatg
gcggacgccatttacattgagccgctgattcccgaaacgattaagcgtattatagaaaag
gaaaaacccgacagtttgctttccacgttgggagggcagacgggtttgacgctttcgatg
cagcttgccaaagaaggttttttggccgaacacggcgtgcagcttttgggcgcccgtccc
gatacgatcgataaggccgaagaccgtcagcttttcaaagatacgatgcaggagatcggc
gaaccgtgcattccgtccaaagtggtaacggatttgcagagcgcgctcgattttaccgac
gaaatcggttatccggtaatcgtgcgtccggcgttcacgctcggcggtaccggcggcggc
atcgcgtattcggaagaagagctgcgcgagattgcgcagaacggactgcaccgttcgccg
attcatcagattctggtggaaaaatgcatttccggctggaaagaaatcgagtttgaggtt
atccgcgacggcagcggcaacgttatcaccgtctgttccatggaaaacttcgatccggtg
ggcgtgcataccggcgacagtatcgtcattgcgccgacggtaacgcttgcggataaagag
tatcagatgctgcgttcggctgcgctcaacatcatttcggcgctcaaaatcgaaggcggc
tgtaattgccaattcgcgctcaagccggacagtttcgagtacgcggttatagaagtgaat
ccgcgcgtttcgcgttcttccgcgctcgcctcgaaggcgaccggttacccgattgccaaa
gtcgcggcgctcattgctatcggttataatctggatgaaattcccaacgcggttaccaag
aaaaccgccgcgtgtttcgagccggtgctcgattacgtcgtcgtcaagtttcccaagtgg
ccgttcgataagttcgtgtacgccaagcgcacgctcggcacgcagatgaaggcgaccgga
gaagttatggcgatcggaacgacgttcgagcaggcgctgatgaaagcggtgcgcggcgcc
gaaatttcggtttcgtcgtgccggctgccgctttttacgcgcgagtcgaacgaacagatc
gtgcgccgcgtgggcgaatgcaccgatcagcggctgttcgccatatacgaagcgatgacg
cgcgggctgctttccgttgaaaagattcatgaaattacgaagatagatatctggtttttg
gcgaaattgcggaatctggtcgcgatggacgcggaattgcaggcagtcaaagacggaaac
gccggattgtcgccggaatcgtatctgaaagccaaaaagctcggctatcctgataaagtg
attcaggaactgagcggcgttcatattcccggtgccgccggtgtgcttgcggagactgaa
gcggcggcttcggcgcgcgctgcgggacttcccgcgcatttgccggcaaaatacaaaatg
gtagacacgtgtgcgggcgagttcaacgccgaaacgccgtatttttacgcagggtacgat
accgaaaacgaagcggaaacgttcctttccgcgcaggaaaaaaagcttgcggaatcggga
accgaatcaaagggccgcattctggttttgggttccgggccgatccgtatcgggcaggga
atcgagttcgactacgcgtcggtgcagtgcgtatgggcgctcaaacggttgggatacgaa
gtcgctatcgtaaacaacaatccggaaacggtttcgaccgacttcgacaccgcagatcgc
ctgtattttgagccgctgactcccgaagacgtaatgaacattatccgtaccgagcggccg
ctcggcgtcgtcgtcgcgttcggcgggcagactgcaatcaagctgaccaaattcctgcac
gatcagggtattaccattttgggaacgagcgccgattccatcgatatggccgaagaccgc
gagcggttcgacgaattgctcgaacggctgaatatcaaacggcctaaaggtttttccgtg
ttgacaacggaagaggccgtttccgccgccgaaaaactgacgtatccggtgctgctgcgt
ccttcgtacgtgctgggcggccagaacatgattatcgcgtttacggaagccgacatccgc
gaatatatggctatcatactcgcgcagaatatcgaaaatcccgtgctgatagacaagtat
ctgatggggattgaacttgaagtggacgcaatctgcgacggtgaagacattctgattccc
ggcatcatggaacacatcgaacggaccggtatccattccggcgactcgatcgccgtgtat
ccggcgtggaacctgaacgacatcctgaccgaaaaaattatcaatcagtcgcgcgaattg
gcgctcgccctcggtacgaaggggctggtcaacattcagtacctgatttacgataacgaa
ttgtatattatagaagtaaacccgcgctccagccgcaccattccgtatatcagcaaggta
accggcgtgccgatggtggaactggccgtgcgcgcgatgctgggcggaaaacttaccgat
atgggctacggtaccggactgtaccgcattccgccgtacgtggcggtaaaagtgccggtg
ttcagttttgaaaagctcatcgacgtggatacgcatttggggccggaaatgaaatcgacc
ggtgaagtgctgggcattgcccgcacgctcgacgaagcgctgtacaagggattgatcgcc
gccgggtatcggatgaaaaaaacgggcggcgtgctcatcacggtgcgcaaaaccgatcag
ttcgagattgtggacacggcgcgtaaatattacgacctcggtttcaaattgtacgcaacg
gaaggaacggcgaaggttatcggcgatttcggaatggacgtgcaagtggtgaacaagatt
cacgagaatcattcggacaacattctgacgctgctggataccggcaagatcgattacgtc
atttcaacgtccgcgaaaggccgtctgccgacgtacgacagcgtgaaactgcggcgcaaa
acggttgagcgcgatattccgtgtctgacgtcgatcgatacggcgaacgcgattgcgaac
agcctcttgagccgatattcgcctgaaagtctcgaactggtgaacatcaacgcgctcagt
aatgcaaagatccgtctcgattttgcaaaaatgcagagtacgggaaacgattttatcgta
ttcaacgcgatggaacaggaaatcatcaatccggaagggctgagcgtccggctgtgcgac
cggcggacgggaatcggtgcggattcgctcgtactgattacgaagtcggccgttgcggac
gcgggaatgcggtttttcaaccgcgacggttccgaaggcaatatggcgggaaacgcgatt
tgctgcgtagccaaatatttgtacgacaacgatatcaacggtatcgccgcgcgcgccgcg
tcggctgtcggtacgcattttacggcggaaatcacggttgaaaccgcgtccggcgtaaaa
cgtctgctggcgtacactcagagcggcaaagtgtcgtccgtgcgggtcgatatgggaaaa
cctgagttcgatccggcaaaaattccggcaaaactcgctgcgtccggcgtaaccggtacg
cccgacggtatcagcattatcggcggcgcggcggttccttcttatccgtgcagtgccgaa
aacgtcgcttccggtaaactgcccgaaaaggccgtggtgcacgcggaattgagcgcggcg
ggcgaatcgtaccgcgcggcggtgcttgcagtcggcacgccgcactgcgtactgttcagc
agcttcgtcgataaaatcgacgtccccggtgtcgggccgctgtttgaaaacaatccggcg
tttccgcgccgtatcaataccgagtttgtgcgtgtcgccggccgcaacagtctcaaaatg
cgcgtctgggagcgcggcaacggcgaaacgcctgcgtgcggaaccggtgcgtgcgcggcg
gccgttgcagcggtgttgaacgggttctgcccgctcgatgaaaacattacggtaaaagtg
cgcggcggcgatctgatcgtcaattataccggtgatacggtgtatctgaccggcggcgcg
gctttggtctataccggcgaaatagaaatctga
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