Treponema brennaborense: Trebr_0577
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Entry
Trebr_0577 CDS
T01489
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tbe
Treponema brennaborense
Pathway
tbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Trebr_0577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbe03019
]
Trebr_0577
03009 Ribosome biogenesis [BR:
tbe03009
]
Trebr_0577
Enzymes [BR:
tbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Trebr_0577
Messenger RNA biogenesis [BR:
tbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Trebr_0577
Ribosome biogenesis [BR:
tbe03009
]
Prokaryotic type
rRNA helicases
Trebr_0577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DbpA
Helicase_C_2
AAA_30
CMS1
Cas3-like_C_2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AEE16020
UniProt:
F4LPS8
LinkDB
All DBs
Position
715089..716987
Genome browser
AA seq
632 aa
AA seq
DB search
MEENISFEDLGLDEITLNAIALKGFEVPSPIQVLAIPRLLGGEANVIAKARTGTGKTAAF
GLPLVQTIREDKGHVRALILAPTRELALQVCKEIDSLTTGTYPRLAAVYGGQSMGEQLRA
LKRGVEIVVGTPGRVQDHIERKSLDLSQIDYFILDEADEMLDMGFIDDIEAIFAKANPES
RILLFSATMPQPILKIASRFMGDYEIVEEETSPEEPVLTEQKYWIVRESDKIEALVRLID
ISPDFYGLVFTQTKADADMITRQLDERGYEAAALHGDIPQAQREKILYRFRNKKTRILVA
TDVAARGIDIEGLTHVVNYALPFDGPTYVHRIGRTGRAGAKGLAFTLVRPEERRKLEYLK
AAVRKSAKGTMTEAPVPPVSDVLAAKRARLFDAMKLSLANGGQSSDDAAGNADGGESADG
FAPPRSAGEDSVFARMAEELCSGKDPQDVLASVLKLSYGKQLDPSRYGDISTLKAFNPGK
QIRLFVQLGRRDGFYPREIAEYFSKLLNIQPRLVDRIDVAENFSLVSLPMQAGMDALERS
KRDHSLPHMHIDSKDAQNGESGFANRPGRRGFGNAESRSGGFRREGREFRHDGGRGFGRD
SERSGGGRSRPPHARQGSAGLYKRKTPQSDRY
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacatctcgttcgaggatctgggactcgatgaaatcactctgaacgccatc
gcgctcaaaggatttgaagtaccgtctccgattcaggttttggcgataccccgcctgctc
ggcggagaagccaacgtcatcgcaaaagcgcgcaccggaaccggtaaaaccgccgcgttc
ggcctgccgctcgtgcagactatccgtgaggacaaaggccacgtccgggcgctcattttg
gcgccgacgcgcgaactggcgttgcaagtctgcaaggaaatcgactcgcttaccaccgga
acgtatccgcggctcgccgccgtatacggcggacaatccatgggcgaacagcttcgcgcg
ctcaaacgcggcgttgaaatcgtcgtcggtacgcccgggcgcgtacaggatcatatcgaa
cgcaaatcgctcgatctgtcgcagatcgactatttcattctcgacgaagccgacgaaatg
ctcgacatgggctttatcgacgacattgaagcgatatttgccaaggcgaatcccgaaagc
cgcattctgctgttttcggcaaccatgccgcagcctattctgaaaattgcgtcccggttt
atgggcgattacgaaatcgtcgaagaagaaaccagtcccgaagaaccggtgcttaccgag
cagaaatactggatcgtgcgcgaaagcgacaaaatagaagcgctcgtgcgccttatcgac
atttcacccgatttttacgggctcgtattcacgcagaccaaagccgacgcggacatgatc
acccggcagctcgacgagcgcggctacgaagcggccgccctgcacggcgatattccgcag
gcgcagcgtgaaaagatcctgtaccgtttccgcaataagaaaacgcgtatcctcgtcgcc
accgacgtcgccgcgcgcggtatcgatatcgaaggattgacgcacgtcgtgaactacgcg
cttccgttcgacggtcccacctacgtacaccgcatcggccgtaccggccgcgcgggcgcc
aaaggtttggcgttcacgctcgtgcgtcccgaagagcggcgcaaactcgaatatttgaaa
gcggccgtccggaaatcggcgaaaggcaccatgaccgaagcgccggtgccgccggtctcg
gatgtgctcgccgcaaaacgcgcgcggctgttcgacgcaatgaaactttctttggcgaac
ggcgggcagtcgtcggacgatgctgccgggaacgccgacggcggcgaatctgcggacggc
ttcgcgccgcctcggagtgccggtgaagattccgtttttgcgcgcatggcggaagaactg
tgcagcggcaaagatccgcaggacgtgctcgcttccgtactgaaactgtcgtacggcaaa
cagctcgacccgtcgcgttacggcgatatttcgacgctgaaagcgttcaatcccggtaag
cagatccggctgttcgtgcagctcggccgccgcgacggtttttatccgcgcgaaatagcc
gaatatttcagcaaactgctcaatatccagccgcgcctggtagaccgcatcgacgttgcc
gaaaacttttcgctggtcagtctgccgatgcaggccggtatggacgcgcttgaacggtca
aaacgcgatcactcgttgccgcacatgcatatcgattcaaaagacgcgcaaaacggggaa
tccggctttgccaatcgccccggacggcgcggcttcggaaacgccgagtcccgttccggc
gggttccgccgcgaaggcagggaattccggcacgacggcggccgcggcttcggacgcgat
tccgaacgttccggcggcggccgttccagaccgccgcacgctcggcagggttcggccggc
ttgtataaacgcaagacgccgcagtccgaccgctactag
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