Treponema brennaborense: Trebr_0957
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Entry
Trebr_0957 CDS
T01489
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tbe
Treponema brennaborense
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbe03032
]
Trebr_0957
03400 DNA repair and recombination proteins [BR:
tbe03400
]
Trebr_0957
Enzymes [BR:
tbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Trebr_0957
DNA replication proteins [BR:
tbe03032
]
Prokaryotic type
DNA Topoisomerases
Trebr_0957
DNA repair and recombination proteins [BR:
tbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Trebr_0957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_8
Zn_ribbon_3
Toprim_2
IBR
Motif
Other DBs
NCBI-ProteinID:
AEE16393
UniProt:
F4LJJ8
LinkDB
All DBs
Position
1154878..1157037
Genome browser
AA seq
719 aa
AA seq
DB search
MAESKTAAAKTSKKKAAKSTLVIVESPAKAKTIEKYLGPGYTVKASMGHLIDLPKSRLAI
DVEHGFNPEYITVRGRAKLLKELQKDAKKADEVLLASDNDREGEAIAWHLKHSFDGKTNA
DIKRIVFNEITPQAITEAVKHPSDIDESKVNAQKARRVLDRLVGYNLSPLLWKKVKNGLS
AGRVQSVALRLICEREVEVENFIPDEYWSLDADFVKGKSKFTAQLVQYKDKKPELPNEAA
VQTIIDEIGAQSCEVVDIKATEKTVRPKPPFTTSKLQQTAANRLGFTSRKTMQIAQQLYE
GVNIGSNRVGLITYMRTDSVRIAQTAIDEVRAWITEKFPAELPEKPIEYAVGKKAQDAHE
GIRPTYVTYTPDSIKEHLTRDQQRLYAIIWERFVSSQMNNAKSRTTSVDIKAGDALFRIS
ASKVVEKGFYKVIKTLSSKEDSTGTLPALKVGEKLETLKFYPEQHFTQGPARFTDASIVK
TLEEKGIGRPSTYAPIISVLLDRYYVTRSNKQLVPTPLGRMINDILVESFPEVVNENFTA
QIENELDEVEEDKVKWSNMLGEFFFPFRDKVNEVMATHESFKGMMDEPTDKICEKCGKPM
VKKLGRFGFFLACSGFPECHNTRSIPLAHCPRPGCNGEIVARKTKGRGKEFYGCTNYPEC
DFISHFKPINAYCPKCGQFLVEKYDKKNGTYKSCINPDCDYLHSNDDAAEPAVPPGDEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcaaaaactgcagcggcaaaaacttcaaagaagaaagccgcaaaatcgacg
ctcgttatcgtggaatcgcctgcgaaagcgaaaacgattgaaaaatatttgggtcccgga
tataccgtaaaagcttcaatggggcatttgatcgatttgcccaaatcgcgccttgcgatc
gacgtggaacacggattcaacccggagtatattaccgtgcgcggccgggcgaagctgctc
aaagaactgcaaaaagatgcaaaaaaagcggatgaagtcctgctggcaagtgataacgac
cgtgaaggggaagccatcgcgtggcatttgaagcattcgttcgacggcaaaacgaacgcc
gacataaagcgaatcgtgttcaatgaaatcacgccgcaggcgattacggaagccgtcaaa
catccgtccgatatcgacgaatcgaaagtgaacgcccagaaagcccgccgtgtgctcgac
cggctcgtcggatacaacctgtcgccgctgctgtggaaaaaagtgaaaaacggtctttcc
gccggccgcgtccaatccgtcgcgctccgtctgatctgcgagcgtgaagtcgaagtcgag
aatttcattcctgatgaatattggagcctcgacgcggatttcgtaaaaggcaaatcgaaa
tttaccgcccagctggtgcaatataaagacaagaaacccgaactcccgaacgaagcggcc
gttcagacaataatcgacgaaatcggggcgcaaagctgtgaagtcgtcgacattaaggcg
actgaaaaaacggttcggccgaaaccgccgtttaccacttcaaagctgcagcagactgcg
gcgaaccgcctcggctttacgtcgcgcaaaacgatgcagattgcccaacagctgtatgaa
ggcgtcaacatcggctcaaaccgcgtcggtctgatcacgtacatgcgtaccgattcggtc
cgtatcgcgcagacggccatcgacgaagtgcgcgcctggattaccgaaaaatttccggcg
gaattgcccgaaaaaccgatcgaatacgcggtcggaaaaaaagcgcaggatgcgcacgaa
ggtatcagaccgacgtacgtaacgtatacgcccgactcgatcaaggaacacttgacgcgc
gatcagcagcgtttgtacgcgattatctgggaacggttcgtttcgagtcagatgaacaac
gcgaaaagccggacgacgagcgtcgatatcaaagctggcgacgcacttttcagaatatcg
gcgagcaaagtcgttgagaaaggattctataaagtcatcaaaacgctttcttcaaaagaa
gattcgaccggtacgctgcctgctcttaaagtgggcgaaaaactcgaaacgctcaaattc
tatcccgaacagcattttacgcaggggcccgcccgttttacggacgcgtctatcgttaaa
acgcttgaagaaaagggaatcgggcggccttcgacgtacgcgccgatcatttccgttctg
ctcgaccggtattacgttacgcgcagcaacaagcagctggttcccacgccgctggggcgt
atgataaacgatattctggtcgaatcgttcccggaagtggtgaacgagaattttaccgcg
caaatagaaaacgaactggacgaagttgaagaagataaagtcaaatggtcgaacatgctc
ggcgagtttttctttccgttccgtgataaagtaaacgaagttatggctacgcacgaaagt
ttcaaaggcatgatggacgagccgacggataaaatctgcgaaaaatgcggtaaaccgatg
gtgaaaaaactcggcaggttcggtttctttcttgcgtgttccggttttcccgaatgccac
aacacccgttccattccgctcgcgcattgcccgcgtcccggctgcaacggtgagatcgtc
gcgcgtaaaaccaaagggcgcggcaaggaattttacggctgcacgaactatcccgaatgc
gattttatcagtcattttaaaccgataaacgcgtattgccccaaatgcggtcaattttta
gttgaaaaatacgataagaaaaacggtacgtataaatcgtgcatcaatcccgactgcgat
tatctgcattcaaatgacgacgccgcggagccagccgttcctcccggagacgaagaatag
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