Treponema brennaborense: Trebr_1058
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Entry
Trebr_1058 CDS
T01489
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tbe
Treponema brennaborense
Pathway
tbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Trebr_1058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbe03400
]
Trebr_1058
Enzymes [BR:
tbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Trebr_1058
DNA repair and recombination proteins [BR:
tbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Trebr_1058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AEE16490
UniProt:
F4LKB6
LinkDB
All DBs
Position
1262397..1263269
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AA seq
290 aa
AA seq
DB search
MLHIGCHLSSAKGFAAMGRDAVTAGADTFAFFTRNPRDGSAKALDSSDADVLNALCAERG
FAKLVAHAPYTMNVCSADAGTRAFSRTVFAEDLKRMEYVPGNYYNFHPGSHVGQGSAAGI
ALIAEALAAVLPAAIHTVVLLETMAGKGSEVGGSFEELRSILDAAAEREAASGGSRFCAD
RLGVCLDTCHVHDAGYDIIGDLDGVLTRFDTCIGLNRLKAIHLNDSMNPAGSRKDRHALI
GQGEIGADALIRVATHPALRELPFILETPTDLAGHAAEIAFLRAAVNRKP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacatcggttgtcatctctcttctgcaaaaggattcgccgcgatggggcgcgac
gccgtgacggccggcgccgatacgttcgcgttttttacccgcaatccgcgcgacggttcg
gcaaaagcgcttgattcttccgacgcggatgtgctgaacgcgttgtgcgcggagcgcggc
tttgcgaaactcgtcgcgcacgcaccgtatacgatgaacgtctgttcggcggatgccgga
accagggccttttcgcgcacggtgtttgcagaagatttgaagcggatggaatatgttccc
ggcaattattataattttcatccgggaagccacgtcgggcagggcagtgccgccgggatt
gctcttattgccgaagcgctcgccgccgtactgccggccgcgattcatacggtcgtgctg
cttgaaacgatggcaggcaaaggttcggaagtcggcggttcgtttgaagaacttcgttca
attttggacgctgccgcggaacgtgaagcggcgtccggcggctcgcggttttgtgccgac
cggctcggcgtatgtctcgatacgtgccacgtgcacgacgccggctacgatataatcggc
gatctcgacggcgtgctgactcggttcgatacgtgcatcggccttaaccggctgaaagcg
attcatttaaatgacagcatgaatcccgccggcagccgcaaagaccgccacgcgctcatc
gggcagggggagatcggagcggacgcgcttatcagggtggcaacgcatccggcgctccga
gagctgccgttcatacttgaaacgccgaccgaccttgccggtcacgccgccgaaatcgct
tttttgcgcgcggcggtgaaccggaagccgtaa
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