Treponema brennaborense: Trebr_1115
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Entry
Trebr_1115 CDS
T01489
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
tbe
Treponema brennaborense
Pathway
tbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Trebr_1115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbe03400
]
Trebr_1115
DNA repair and recombination proteins [BR:
tbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Trebr_1115
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Trebr_1115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
SWI2_SNF2
AAA_22
UB2H
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AEE16547
UniProt:
F4LKH3
LinkDB
All DBs
Position
1327047..1329044
Genome browser
AA seq
665 aa
AA seq
DB search
MRPFKVVAPYEPSGDQPQAIERLVEGFLRGDTYQTLKGVTGSGKTFTMAKIIEKVQRPTL
IISHNKTLSAQLYREFKSFFPDNAVEYFVSYYDYYQPEAYVPARDLYIEKDASINDEIDR
MRLAATYSLMERRDVIVVATVSCIYGLGMPELYKDMRIHIEKGQTLDPAAFGRQLVTLQY
ERNDAVLDRGRFRIRGDVLEVYPAYMETDEAYRIELDWEEIVRIRRFNTISGEIIEELDE
TTIYPAKHFVVPPEMLKSATDRIKSEMEDRVQFLQQTGKILEAERLKTRTSYDLEMLSEM
GYCPGIENYSGPISGRRSGEPPATLLHYFPSDTLCLIDEAHVTVSQIGAMYEGDRSRKQN
LIDFGFRLPSALDNRPLKYAEFESMISQTIYVTATPREQEIKRSTQVVEQLIRPTGLLDP
IVEVRPSEGQMEDIYGEIKERIARGERCLLLTLTKKMAEDLTEYLDGLGLKVRYIHSEVE
TIERVEILKGLRSGEFDVLIGINLLREGLDLPEVSFIAILDADKIGFLRSATSLIQIIGR
AARNQNGMVVMYADRESDAMKAAIEETVHRREVQEAYNTAHGITPATVSKAVADILVRQN
EDKKAAVETETAVLRKSVNLFVPAQRRKLIKALEKQMSEFADCLEFEQAAAVRDEIAAIK
EQYGA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagaccatttaaagtcgtcgctccgtacgaaccttcgggcgatcagccgcaggctatc
gagcgccttgtcgaaggttttctgcgcggagacacgtatcagacgctcaaaggcgtaacc
ggatccggcaaaacgtttacgatggccaagataatcgaaaaggtgcagcggcccacgctc
attatcagccacaacaagacgctgtccgcgcagctgtaccgcgaattcaaatcgtttttt
cccgacaacgcggtggaatatttcgtgtcgtattacgattattatcagcctgaagcctac
gttccggcgcgcgacttatatatagaaaaagatgcgtcaattaacgatgaaatcgaccgt
atgcgtctggccgcgacgtacagtctgatggagcggcgcgacgttatcgtcgtagcgacg
gtttcctgtatttacggtttgggaatgcccgaattgtacaaggatatgcgcatccatata
gaaaaaggccaaacgctcgatcccgccgcgttcggacggcagctcgttactttgcagtac
gaacgcaacgacgccgtgctcgatcgcggccggtttcgcatccggggcgacgttctggaa
gtgtatccggcttatatggaaaccgacgaagcgtaccgtattgagctcgactgggaagag
atcgtgcgcatccgtcggttcaatacgatttcgggtgaaataatagaagaactcgacgaa
actacgatttatccggcaaagcacttcgtcgtgccgccggaaatgctcaaatcggcgacg
gatcgtatcaagtccgaaatggaagaccgcgtgcagtttttgcagcagaccggcaaaata
ctggaagccgaacggctgaaaacgcgcacttcgtacgatcttgaaatgctttccgaaatg
gggtattgccccggtattgaaaattattcgggccccatctcaggccgccgctccggtgag
ccgccggctacgctgctgcactattttccgtccgacacgctgtgcctgatagacgaagcg
cacgtaacggtgtcccagatcggcgcgatgtacgaaggcgaccgttcgcgcaagcagaat
ctgatagacttcggcttccgactgccgagtgcgctcgacaaccgtccgctcaagtacgcc
gagtttgaatcgatgatcagtcagacgatttacgtaacggcgaccccgcgcgaacaggaa
ataaagcgcagcacgcaagtggtggaacagctgatccgtcccaccggattgctggatcct
atcgttgaagtacgccccagcgaagggcagatggaagatatttacggtgaaataaaagag
cgcatcgcgcgcggcgaacggtgtctgcttttgacgctgaccaaaaagatggccgaggat
ttgaccgaatatctggacgggttgggactcaaagtcagatatatccattccgaggtcgaa
acgatcgaacgcgttgaaatccttaaaggtctgcgttccggcgaattcgacgtgctgatc
ggcataaatctgctgcgcgaagggctcgatttgcctgaagtgtcttttatcgcgattctc
gatgccgataaaatcggatttctgcgttcggcgaccagtctgatccaaataatcgggcgt
gcggcgcgaaatcagaacgggatggtcgtcatgtacgcggatcgtgaaagcgacgcgatg
aaagccgcgattgaggaaaccgtacatcgccgcgaagtgcaggaagcgtataatacggcg
cacggtattacgcccgcgacggtttccaaagcggtggcggacattctggtgcgccagaat
gaagacaaaaaagccgccgtggaaaccgaaaccgccgtattgcgcaaaagcgtcaacctg
ttcgttccggcgcagcggcgtaaacttatcaaagcgcttgaaaagcagatgtccgaattt
gccgactgcctcgagttcgagcaggctgccgccgtgcgcgatgaaatcgccgcgatcaag
gaacagtacggcgcgtaa
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integrated database retrieval system
