Treponema brennaborense: Trebr_1278
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Entry
Trebr_1278 CDS
T01489
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
tbe
Treponema brennaborense
Pathway
tbe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Trebr_1278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbe03021
]
Trebr_1278
Transcription machinery [BR:
tbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Trebr_1278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_r1_2
HTH_11
HTH_10
HTH_32
HTH_23
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AEE16705
UniProt:
F4LM26
LinkDB
All DBs
Position
1513928..1514737
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AA seq
269 aa
AA seq
DB search
MEKNIYASYMAQIQRYPLLTPEQEKKLSADIHNGDTSAKLKLVQSNLRLVVSIANKYVSD
RIGVMDLIQEGNLGLLTAASKFHYSFNTRFSTYAYSWITQYILRFIQNKIPYITLPHRKE
EMLRKIHMAKIDLMQQLQSEPTLREIASYMDVSESDISGALMHEYVYSSIDAEIDGTSNL
TCADMIADPSPSPEQLCLKNLEAEDIRSLVETLPDRERQVIYYRFNFDNSRKPWTLRQIS
EMLGISAETVRQMELRALQFLRTAAVKVS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaacatctacgcaagttatatggctcaaatccagcgttatccgcttttgacc
cccgaacaggaaaaaaagttgtccgccgatattcacaacggcgacacttcggctaagttg
aaactcgttcaaagcaatttgcgtctcgtcgtcagtattgcgaacaaatacgtttcagac
cgcatcggcgtcatggatctgattcaggaaggcaatctcggtctgctgacagccgcttca
aaattccattattcgttcaatacccgtttttcgacgtatgcgtattcgtggattacccaa
tacatactgcgtttcatacaaaataaaattccgtacatcacgctgccgcaccgcaaagaa
gaaatgctgcgtaaaattcatatggcaaaaatagatctgatgcagcagctgcaaagcgaa
ccgaccctgcgggaaatcgcctcgtatatggacgtatccgaatccgacatatccggtgcg
ctgatgcatgaatacgtatattcgagcatagacgccgaaatcgacggcacgtcgaatctg
acctgcgcggacatgattgccgatccgtcgccgtctcccgaacagctgtgtctcaaaaac
cttgaagcggaagacatccgttctctcgttgaaacgctgcctgatcgggaacggcaggtc
atttattaccgattcaatttcgacaacagccgtaagccctggacgctccggcaaataagc
gaaatgctcggtatttcggcggaaacggtccggcagatggaactgcgcgcgctacagttc
ctgcgcaccgccgccgtgaaagtatcgtaa
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