Treponema brennaborense: Trebr_1286
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Entry
Trebr_1286 CDS
T01489
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tbe
Treponema brennaborense
Pathway
tbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Trebr_1286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbe03019
]
Trebr_1286
Enzymes [BR:
tbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Trebr_1286
Messenger RNA biogenesis [BR:
tbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Trebr_1286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
CMS1
DUF4391
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AEE16713
UniProt:
F4LM34
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All DBs
Position
1524734..1526566
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AA seq
610 aa
AA seq
DB search
MEFTEFDLHEELQKGIAGAGYVTCTPVQEQVLKGSLEGADLYVQSQTGTGKTAAYLISII
QEMLTREEVAGKKALVMVPTRELAVQVEQEAKKLLEFTPLKAGSFYGGVGYTQQTAMLKN
NVNIIIGTPGRVIDLQESGAMDLSSVAFLVVDEADRMFDMGFYPDLRTLIKVLPKTHDRQ
TMLFSATLNTYVKNLAWEYTEEAKEITIEAEQLTVEEIDQVLLHVSSDSKMKLLLGILQH
EKPESVIVFCNTKRSCEVVAKRLQLNGIESEFIIGDLPQAKRLQVLESFKRGSLKCLVAT
DVAARGIDVNDLAMVVNYDLPNESENYVHRIGRTARAGKSGKAYTFCSEQDVYNLPAIER
YLGAPIPASVAYEDMMTEDKSASVYIRTGDYGDDDGRPFRNRRDGGDRRGASRSGDSRRP
PRDGAAADSRNNRNRRGPDEARFDGDRKPRTDIRTERGGRNDRTERAPRGKPGQERAAGS
YRKNAPVRAENRYQDRREETENLAALPFDERMKRYKEKYADTASASAGSRDKNAAKRRAT
AAGGKNGGKRYEKNTPRGERKEFRRGADGYAGNTENRYQNRRTQSAPETVQKKNGLLGRI
KSLFSKKKKD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaatttacagaatttgatttgcacgaagagctccagaaaggtatcgccggagccggt
tacgtaacgtgcacccctgtgcaggaacaggtgttgaaaggttcgcttgaaggagccgat
ttgtatgtccaatcgcagacgggaacaggaaaaactgcggcttatttgatttcgatcatc
caggaaatgctgacgcgtgaggaagtcgccggtaaaaaggcgctcgttatggtacccacg
cgcgaactcgccgtacaggtcgagcaggaagcgaaaaaactgttggaattcacaccgctg
aaagccggaagtttttacggcggcgtcggatatacccagcagaccgccatgctcaaaaac
aacgtgaacatcatcatcggaacgcccggccgcgtcatcgacttgcaggagtccggcgcg
atggatttgagcagcgtcgcgtttttggtcgtagacgaagccgaccgcatgttcgacatg
ggattttatcccgatctgcgcacgctgatcaaagtgctgccgaaaacgcacgaccgccag
accatgctgttcagcgcgacgctgaacacgtacgtcaaaaatctcgcctgggaatacacc
gaagaagccaaagaaatcacgattgaagcggaacagctcaccgtagaagaaatcgatcag
gtgctgctgcacgtttcgagcgactccaaaatgaaactcctgctcggcattctgcagcat
gaaaaaccggaaagcgtcatcgttttctgcaataccaaacgcagctgcgaagtagttgca
aaaagactgcagctgaacggaattgaaagcgaattcattatcggcgacctgccgcaggcc
aaacgtctgcaagtactcgaatcgttcaagcgcgggtcgctcaaatgcctggtcgcgact
gacgttgcggcgcgcggcatcgacgtaaacgaccttgcgatggtcgtcaactacgatctg
cccaacgaatcggaaaactacgtgcaccgcatcggccgcaccgcgcgcgccggaaaaagc
ggcaaagcctacacgttctgcagcgaacaggacgtgtacaacctgcccgcgatcgaacgg
tatttgggcgcgcccataccggcgtccgtcgcgtatgaagacatgatgacggaagacaaa
agcgcgagcgtgtatatcagaacgggcgattacggagacgacgacggccgcccgttccgg
aacagaagggacggcggcgatcgtcgcggtgcgagccgcagcggagattcccgcagaccg
ccccgcgacggtgcggcggcagattcccgcaacaatcggaaccgccgcggaccggatgaa
gcgcgcttcgacggcgaccgcaagccgcgcaccgatatcaggacagaacgcggcggcagg
aacgatcgcaccgaacgcgcgccccgcggaaaaccgggacaggaacgcgccgcaggatcg
taccgcaaaaacgcaccggttcgcgcggaaaaccggtatcaggaccgccgcgaagaaacg
gaaaatttggcggcgcttccgttcgacgagcgcatgaaacgctacaaggaaaaatacgca
gacaccgcgtccgcatcggcaggctcgcgcgataaaaatgcggcgaaacgccgcgccact
gcagccggcggtaaaaacggcggcaaacggtatgaaaaaaatacgccgcgcggcgaacgg
aaagagttccgccgcggtgcggacggttacgccggaaacacggaaaaccgatatcagaac
cgccgtacccaaagcgcgccggaaacggtacagaaaaaaaacggacttttgggccgcata
aagagcctgttcagcaaaaagaaaaaggattaa
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