Treponema brennaborense: Trebr_1413
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Entry
Trebr_1413 CDS
T01489
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tbe
Treponema brennaborense
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Trebr_1413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbe03019
]
Trebr_1413
03009 Ribosome biogenesis [BR:
tbe03009
]
Trebr_1413
03036 Chromosome and associated proteins [BR:
tbe03036
]
Trebr_1413
Enzymes [BR:
tbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Trebr_1413
Messenger RNA biogenesis [BR:
tbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Trebr_1413
Ribosome biogenesis [BR:
tbe03009
]
Eukaryotic type
90S particles
RNase
Trebr_1413
Prokaryotic type
rRNA processing factors
Trebr_1413
Chromosome and associated proteins [BR:
tbe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Trebr_1413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AEE16837
UniProt:
F4LN72
LinkDB
All DBs
Position
complement(1671535..1672305)
Genome browser
AA seq
256 aa
AA seq
DB search
MFRFKAMFKNVKDIFFKDSTLSAARRNQLLDFERAISVHFNDLQLLDLAFHHRSYSNEGA
NTRYNNERLEFLGDAVLGMATATYLYESMLERPEGDLARIKSVVVSEMTLAPIALEIGVD
SCLVLGKGEELSGGRTKKAILADAVEAVIGAYYLDSGYSAAEKLVLELIVPEIQKVLQNK
HHRDYKTLLQEFYQKKYKECPVYELVKRTGPDHDRTFWVSVHLHSVTYGPASGKNKKEAE
QSAARLAWEAVEGGDC
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcgttttaaagcgatgtttaaaaacgtaaaagatatatttttcaaagattcgact
ctctccgcagcgcgcagaaatcaactgctcgatttcgagcgtgcaatttccgttcatttt
aacgacctgcagctgcttgatttggcgtttcatcaccgttcgtactccaacgaaggcgca
aatacccggtacaacaacgagcggctggaatttttgggagacgcggtgctgggcatggcg
acggcgacgtacctgtacgagtcgatgctggaacgcccggaaggcgatcttgcacgcata
aaatcggtcgtcgtgtccgaaatgacgcttgcgccgattgcgcttgaaatcggtgtcgat
tcgtgtctggtgctgggcaagggcgaagaactttccggcggcaggacgaaaaaggccatt
cttgccgatgcggtggaagccgtaatcggcgcttattatctcgattccggatattccgcc
gcggaaaaactggtgcttgaactgatcgtgcccgaaattcagaaagtgctgcagaacaag
catcaccgcgactataaaacgctgctgcaggaattttatcagaaaaaatataaggaatgt
ccggtatacgaattggtaaagcggacggggcctgatcacgaccgaactttttgggtgtcc
gttcatctgcacagcgttacctacggccccgcgagcggcaaaaataaaaaagaggccgaa
cagtccgccgcccggcttgcctgggaagcggtggagggcggcgactgctga
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