Treponema brennaborense: Trebr_1883
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Entry
Trebr_1883 CDS
T01489
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tbe
Treponema brennaborense
Pathway
tbe00061
Fatty acid biosynthesis
tbe00071
Fatty acid degradation
tbe01100
Metabolic pathways
tbe01212
Fatty acid metabolism
tbe02024
Quorum sensing
tbe04146
Peroxisome
Module
tbe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Trebr_1883
00071 Fatty acid degradation
Trebr_1883
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Trebr_1883
09145 Cellular community - prokaryotes
02024 Quorum sensing
Trebr_1883
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tbe01004
]
Trebr_1883
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tbe04147
]
Trebr_1883
Enzymes [BR:
tbe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Trebr_1883
Lipid biosynthesis proteins [BR:
tbe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Trebr_1883
Exosome [BR:
tbe04147
]
Exosomal proteins
Exosomal proteins of breast milk
Trebr_1883
Exosomal proteins of breast cancer cells
Trebr_1883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEE17302
UniProt:
F4LIZ3
LinkDB
All DBs
Position
complement(2217538..2219460)
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AA seq
640 aa
AA seq
DB search
MQTISDLGTYTFPALFRNTLLKFSECSALSMVHGTPITYRELNARVERAARLLYKNGFAP
KQKFAVFSSGMPNWGAAYLAIVNNGGIAVPLLPDFTAGEVEAILRHAEVDGMFVSDRLYA
RIESLAPELLPVVIKLDDFSVLRGGRAPAETAAAEHAAADNAQAADESAAPLPDVPVAET
DTASIIYTSGTTGRSKGVELSHKNLVWTAIQCQTIHRVNKLDRCLSFLPLSHVYEFTIGF
AMQILNGSCVYYLEKPPTVSTLLPAFKLVRPTVVLSVPLIMEKIYKNKIVPTFTSKKLVA
RLYSIPLFRILMNRAAGKQLKKTMGGKIKFFGIGGAKVDPEVERFMKEARFPYAIGYGLT
ETSPLLAGSGPKETVPGTIGPVMEGVVMRILDPDPRTGIGEVIACGPNVMRGYYRDEALT
EQAFTTAADSCGSGWFKTGDLGLLEKRKGRLWLSLKGRSKNMILGASGENIYPEDIEFIL
NQHPLVSESLVVEDGNGLVALVQLDEEKMKAEEKKRVAQPSAGKPAAGKPGLLPLPEVLQ
TAVENAAAAVSNAVEELKGDLLYKREEILSEIQFFINNKVNRISKIGKVESVAQFEKTAS
QKIKRYLYNLKHGTHSPEGAPAPQNLRDSDARDAADKNGN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgatttctgatttaggaacatacacgtttccggccctgttccggaatacgctt
ttgaaattttccgaatgcagcgcgctttctatggtacacggaactccgatcacgtaccgg
gaattgaacgcgcgggtcgaacgggcggcgcggctgctgtataagaacggtttcgcgccc
aagcagaaatttgccgttttcagttccggaatgccgaactggggcgccgcgtatttggcg
atcgtcaacaacggcggcatcgccgttcctcttttacccgattttacggccggagaggtt
gaagcgatcctgcgtcacgcggaagtagacggtatgttcgtcagcgaccgcctgtatgcg
cgcatagaatcgctcgcaccggaattgctgccggtcgtcatcaaattggacgatttcagc
gtgcttcgcggcggacgcgcaccggcggaaactgctgcggcggagcacgctgcggctgat
aatgctcaggcggctgatgagagcgccgcgcccttgcccgacgtgccggttgccgaaacc
gatacggcttcgatcatctatacgtcgggaacgacggggcgctccaaaggagtggaactg
tcgcataagaatctggtgtggacggcaattcagtgtcagacgattcaccgcgtaaacaaa
ctcgaccgctgcctgtcttttttgccgctgtcgcacgtgtacgagtttaccatcggattc
gcgatgcagatactgaacggcagctgcgtttattatcttgaaaaaccgccgaccgtttcg
acgctgcttcccgcgttcaagctcgtgcgtccgaccgtcgtgctgagcgtgccgcttata
atggaaaagatttacaaaaacaaaatcgttccgacctttacgtcgaaaaaactcgtcgcc
cgattgtactcgattccgttattcagaatactgatgaaccgagccgccggaaaacagctg
aagaaaacgatgggcggtaaaatcaagtttttcggtatcggcggggcgaaggtggatccc
gaagtcgagcggtttatgaaagaagcgcgctttccgtacgcgatcggctacggactgacc
gaaacgtctccgctgcttgccggttccggtccgaaagaaacggttccgggtactatcggg
ccggtgatggaaggggtcgtgatgcggattttggatcccgatccccgtacgggaatcggt
gaagtcatcgcgtgcgggccgaacgtaatgcgcggctactatcgcgacgaggcgctgacg
gaacaggcgtttacgaccgccgcggacagctgcggttcgggctggtttaaaaccggcgat
ttgggtttgcttgaaaagcgtaaaggccgtttgtggctgtcgctgaaaggccgctcgaag
aacatgattttgggtgcgtccggcgaaaatatttatcccgaagacatcgaattcattttg
aatcagcatccgctggtttcggagtcgctcgtggttgaagacggcaacggcttggttgcg
ctcgttcagcttgatgaagaaaaaatgaaagcggaagaaaaaaaacgtgtcgctcagccg
tctgccggaaaaccggccgccggaaagccgggattgctgccgttacccgaagtgctgcag
actgccgttgaaaacgccgctgcggcggtaagcaacgcggttgaagaactgaaaggcgat
ttgctgtacaagcgcgaagaaattctttccgaaatccagtttttcataaacaataaggta
aaccggatttcaaaaatcggcaaagtggaatccgtcgcgcagtttgaaaaaacggcaagt
cagaaaataaaacgatatctgtataacttgaaacacggtacgcattcgcccgaaggggcg
cctgcgccgcagaatttgcgtgattccgatgcgcgcgacgcggcggataaaaacggaaac
tga
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