Treponema brennaborense: Trebr_2076
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Entry
Trebr_2076 CDS
T01489
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tbe
Treponema brennaborense
Pathway
tbe03030
DNA replication
tbe03410
Base excision repair
tbe03420
Nucleotide excision repair
tbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Trebr_2076
03410 Base excision repair
Trebr_2076
03420 Nucleotide excision repair
Trebr_2076
03440 Homologous recombination
Trebr_2076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbe03032
]
Trebr_2076
03400 DNA repair and recombination proteins [BR:
tbe03400
]
Trebr_2076
Enzymes [BR:
tbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Trebr_2076
DNA replication proteins [BR:
tbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Trebr_2076
DNA repair and recombination proteins [BR:
tbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Trebr_2076
NER (nucleotide excision repair)
GGR (global genome repair) factors
Trebr_2076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
SpnB_Rossmann
CENP-F_C_Rb_bdg
DNA_pol_P_Exo
Motif
Other DBs
NCBI-ProteinID:
AEE17491
UniProt:
F4LK29
LinkDB
All DBs
Position
complement(2451863..2454643)
Genome browser
AA seq
926 aa
AA seq
DB search
MNDFSDPDSTLYILDSYGLIYRSYYAFINRPLTDKDGKNVSAVFGFFRNFKAVLDHYKPR
YIAAAFDSRKATFRHEMYADYKATRQKTPEDLHAQVPVIEEILTALGIPVLRCDGFEADD
VIATIASVCGAENRCCRILSADKDLMQLVNDTTQILKPDKNGGWEIVGKDGVKAEWGVEP
ELMLDLLSLIGDSSDNVPGVSGVGIKTALKLLDEYGSLDGIFAHADDISGAVGNKIRAGK
DAAYFSKSLIALRYDVPVDTCVPSFGTVSLDYEAASRLLFRYGVPAVAKQYASVPLPAGS
ETEAIQSKGPTGLIPDEPVFEELTKNTGDYMAVTSIAVLASYIDEILASEPIEAAFDCET
DSLDRIHTRIVGFSLSRRAGTGIYVPLSVPDALLTQTLIEKQDAFVQLERLFSVPACTLA
MHNGKFDYEVLRSNGLAEPRCRIADTMVAAWLLDPDRSAYSLEALAADKLGLETIPYTDV
VPKGSTFADIPLEQAVPYAAEDADLTWQLYRLFLPRLAAAKLGDLFWNLEMPVLPILAEM
ELDGIHIEKSELISYGEELTAEIERIRREIYELVGHEFNVASTKQLQDVLFEERKLPPGK
KTKTGYSTDTGVLETLAALDPVPRKILDYRLKTKLFSSYVDTLPLMVDGNDRIHTSFIQT
GTATGRLSSREPNLQNIPVRDEDGRRIRLAFTAEPGCQLISADYSQIELVILAHLSGDPN
LCAAFSGGTDVHRATAALIFGVQPDAVTPDMRRTAKTINFGVMYGMSAFRLAGALGIPRT
QAAEFIEAYFKTYAGVRNFMNEMVNAAQQSGFVETIFGRRRYIRAINSSSKIEKSGAERV
AVNTPIQGSAADIVKKAMIDVAAALKKTGSPARLLLQVHDELILECPQESAAETASLIKQ
TMENVVSLRVPLKVSVEIGPRWGDFH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttttccgatcctgactcaacgctgtatattcttgattcatacggacttatt
tatcgttcgtattatgcgttcatcaaccgtccgcttacggataaagacggaaaaaacgta
tcggctgtattcggttttttccgtaatttcaaagcggtgttggatcactataagccgcga
tatatcgcggcggcgttcgattctcgtaaggcgacgtttcggcatgaaatgtatgccgac
tataaagcgacaaggcaaaaaacgcccgaagacctgcacgcgcaagttcccgttatagag
gaaattttgacggctctgggcataccggttctgagatgcgacggctttgaagcagacgac
gtaattgcgacgattgcttccgtgtgcggagcggagaataggtgctgccggattttatcc
gcggataaagatctgatgcagctggttaacgatacgacacagatacttaaaccggataaa
aacggcggttgggagattgttgggaaagacggtgttaaagccgaatggggtgtcgagcct
gaattgatgctcgatttgctttctcttatcggtgattcttccgataacgtgccgggcgtt
tccggcgtgggtatcaaaacggcgctcaaattacttgacgaatacggttcgctcgacgga
atttttgctcatgccgacgatatttcgggagcggtgggcaataaaatccgcgccggaaaa
gatgccgcgtatttttcaaagtcgctgatagcgctccggtacgatgtgccggtcgatacg
tgcgttccgtctttcgggaccgtatcgcttgattacgaagcggcttcccgccttttattc
cgatacggcgtgccggcggttgcaaaacagtacgcatccgttccgcttcccgccggatcg
gaaactgaggcgattcagagtaaagggccgaccggactgattccggatgaacccgttttt
gaggaactgacgaaaaatacgggggattatatggcagttacgtcgattgccgttttggct
tcatatatagacgaaattcttgcgtccgagcctattgaagcggcgttcgactgtgagacg
gacagcctcgaccgcatccatacccgtatcgtcggattttcgctttcccgccgcgccgga
accggtatttacgttcccctttcggttccggatgccctgttaacgcagacgcttatagaa
aaacaggatgcgttcgttcagcttgaacggttgttttccgtcccggcctgtacgctcgcc
atgcacaacggtaaattcgactatgaagttctgcgttcaaacggtttggcggaacctcgc
tgccggatagcggatacgatggtagccgcttggctgctcgacccggatcgttccgcgtat
tcgctggaagcgcttgccgccgataaactcggtctggaaacgattccgtatacggacgtg
gtgccgaaggggtccacttttgccgatattccgcttgaacaagccgtgccgtacgccgct
gaagatgccgatctgacgtggcagttatatcgattgtttctgccgcggcttgccgctgca
aagctgggcgatttgttttggaatcttgaaatgccggtgttgccgattcttgccgaaatg
gaactggacggcattcatattgaaaaaagcgaactgatttcctacggagaggaacttacg
gcagaaatcgagcgtattcggcgtgaaatttatgaattggtagggcatgaattcaacgtc
gcgtccaccaagcagctgcaggacgtgctgtttgaggaacggaagcttccgcccggtaaa
aaaacgaaaaccggatattcgaccgataccggcgtacttgaaacgcttgccgcgcttgat
ccggtgccgaggaaaattctcgattaccgattgaaaacgaaacttttttcgtcgtacgtc
gacacgctgccgcttatggtcgacggcaatgaccgcatacacaccagtttcattcagacg
ggtaccgcgacggggcgtttatcgagccgggaaccgaatttgcagaatattccggttcgg
gatgaagacggacggcgcatcagactggcgtttacggcggaaccgggatgtcagttgatt
tccgccgactattctcagatcgaattggtaattttggctcatttgtccggagatccgaat
ctctgcgcggcgttttcgggcggcaccgacgtgcatcgtgccacggcggcgctcattttc
ggagttcagcctgacgcggtaacgcccgatatgcggcggacggcaaaaacgatcaatttc
ggcgtcatgtacggtatgagtgcttttcggcttgccggtgcgttgggaattccgcggact
caggcggccgaattcatcgaggcctattttaaaacttatgcaggcgtccgcaatttcatg
aacgaaatggtgaatgcggcgcagcaatccggattcgttgaaacgattttcggtcgccgg
cggtacatccgtgcgattaacagcagcagtaaaatcgaaaaatcaggtgcggagcgcgtt
gcggtgaacacgccgatacagggttccgcagcggatatcgtaaaaaaggcgatgatcgac
gtggcggccgctctgaaaaagaccggttccccagcgcggcttttattgcaggttcacgat
gaattgattcttgagtgtccgcaggaatcggctgccgaaacggcttctttgattaagcag
acgatggaaaacgtcgtttcgctcagagttccgctgaaggtttccgttgaaatcggaccc
cgctggggtgattttcactga
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