Treponema brennaborense: Trebr_2157
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Entry
Trebr_2157 CDS
T01489
Name
(GenBank) Pectate disaccharide-lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
tbe
Treponema brennaborense
Pathway
tbe00040
Pentose and glucuronate interconversions
tbe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Trebr_2157
Enzymes [BR:
tbe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
Trebr_2157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
fn3
Pur_ac_phosph_N
Ig-like_KY
Motif
Other DBs
NCBI-ProteinID:
AEE17572
UniProt:
F4LKL6
LinkDB
All DBs
Position
2550262..2553228
Genome browser
AA seq
988 aa
AA seq
DB search
MKRTASLFKRLCVWYCAAVVFFPLFAADRKPWDQTAVPVITAAQTLPDAPGTVELTCMLE
TSTDGADKGLAEMLDQSLNVVDSKPIGKTRRDEKKITFTPPKSGTYSFRVTALRTGEKEG
LVSESVTVRFTLPLEKPAVQLLNAGGGALELSWSAVPEASSYVVRYTDVRTGTAAEKTAG
STTHAQLTGLTAGSTYAVSVAAVRGAGSASADVAYSDPIDKLIKNEREREWQFAWFGQSS
SKDRNTMRMIDGNNLTFELNSCTFDPATQMIKDKGGKFTAFHDGISYYYTVIDPDTENFE
LTATFTVDYINITADGQEGFGILAMDSIGQNGVNAVNHYTNSAGVIATKFEKTINGVKKT
SKDTLGARFVSGITGDVIALGDSGIAQYGKSVSDAYSYDQSDLVRAGDTYRVTLKKTNTG
YHAIFKRTIASEDTIEEYIMYGPEKLRQLDADHVYVGFAAARGCNVTVSDVSMKITDPAA
DPAAQEEPPELIPLTVKVDSPSTYHTSKYPFVFTSNADGLLTVTDKNGKTPVKNAKVKAL
IDYKKTIKVPAGLNDYQITFTPDPDFRPGEKQAIAQYNAELKTYEQDYKSVSIVHTVINK
SYGRAELYAAPDGSAFGDGSPENPLDIQSALNYVKPGQTVVLSGGTYYPTRGIMIERGNS
GVKKSAKNITRKTLRSADGTRAILDFTSAGAGFQLWGDCWLIEGIDIRNTPGNVKGLQVA
GSDNVVRRVNTYSCGDTGLQISGVSSETFPKWPARNLIENCTSYGNIDPAANNADGFAAK
LTCADGNVFRGCIAYGNIDDGWDLFAKIESGPIGAVLIENCIAYKNGSLPDGSGNGDGNG
FKLGGDGIAVPHVLRNSISFGNGTSGITSNSDPAIKLENVTSYGNKGANINLYGKGKETE
RQFAVSNSISMEGMSADEYKEMPSLAAPGNYFWNGAQSLNSEGRQLTPDVFVSTDTDIVP
VRKADGSIDMKGLLELTDAAPAGVGARF
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaccgcatctctattcaaacggctgtgcgtatggtattgcgccgctgtcgta
ttttttccgctctttgcggcggatcgaaaaccctgggatcagacggccgttccggtcatt
accgcggcgcaaacgctgccggacgcaccgggaaccgtcgagctcacctgtatgcttgaa
acctcgaccgacggcgcggacaaaggtcttgccgaaatgctcgatcagtcgctgaacgta
gtcgattcaaaaccgatcgggaaaacccggcgcgacgaaaagaaaatcacgtttacgccg
cctaaaagcggtacgtattcgttcagggtaaccgcgctgcgcaccggagaaaaagaaggc
ctcgtctctgaaagcgttacggtccgctttaccctgccgcttgaaaaacccgccgtccag
ctgctcaacgcaggcggcggagcgctcgaactgtcatggagcgccgttcccgaagcttcg
tcgtacgtcgtccgctataccgacgtccgaaccggcacggcagccgaaaaaaccgccggc
agcacgacgcacgcgcagcttaccggtcttaccgccggcagcacgtacgccgtcagcgtc
gccgcagtgcgcggagccggcagcgcatccgccgacgttgcatactcggatcctatcgac
aagctgataaaaaacgaacgggaacgcgaatggcagttcgcctggttcggccagtcgagc
agcaaagaccgcaatacgatgcgcatgatcgacggcaacaatctgacgtttgaactgaac
tcgtgcacgttcgatccggcaacgcagatgataaaagacaaaggcggaaaattcaccgcc
tttcacgacggtatttcctactattataccgttatcgatcccgataccgaaaactttgaa
ctgaccgcaacgtttaccgtcgattacatcaatataaccgccgacggacaggaaggcttc
ggcattctcgcgatggacagtatcgggcagaacggcgtgaacgcggtaaaccactacacg
aattcggccggcgttatcgcgaccaaatttgaaaaaacgatcaacggtgtcaaaaaaacg
agcaaagacacgctcggcgcacgcttcgtttcgggcatcaccggcgacgtcatagcgctc
ggagacagcggcatcgcgcagtacggaaaaagcgtttccgatgcatacagttacgatcag
tctgaccttgtccgggcgggagacacgtaccgcgttacgctcaaaaagacgaacacgggt
tatcatgcgattttcaaacgaacgatcgcgagtgaagatactatagaagaatacatcatg
tacggcccggaaaaactgcgccaactcgatgcggatcacgtgtacgtcggctttgccgca
gcgcgcggctgcaacgtaacggtcagcgacgtgagcatgaaaattaccgatccggcggcc
gatccggcagcacaggaagaaccgccggaattgattccgctcacggtcaaagtcgattcg
ccctcgacgtatcatacgtcgaaatatccgttcgttttcacctcgaacgccgacggactg
ctcaccgtaacggataaaaacggcaaaacgcccgtcaaaaatgcaaaagtgaaagcactg
atcgactataaaaaaacgatcaaagtacccgccggtctgaacgattatcagataacgttc
acgccggatcccgatttccgccccggagaaaaacaggcgatcgcccagtacaacgccgaa
ctgaaaacgtacgaacaggattacaaatcggtgtcaatagtacacacggttatcaataaa
tcgtacggccgggcggaattgtacgccgcgccggacggcagcgcgttcggcgacggttcg
cctgaaaacccgcttgacattcaaagcgcgctcaattacgtaaaacccggtcagaccgtc
gtgctgagcggcggcacgtattatccgacgcgcggcatcatgatcgaacggggcaacagc
ggcgttaaaaaatcggcaaaaaacatcacgcgtaaaacgctccgcagcgcggacggaacg
cgcgcgattctcgattttacctcggcaggcgcggggtttcagctttggggcgactgctgg
cttatcgaaggcatcgacatccgcaacacgccgggcaacgtcaaagggctgcaagttgcc
ggaagcgacaacgtcgtgcgcagagtgaacacgtattcgtgcggcgacacgggtctccaa
atcagcggcgtcagcagcgaaacgtttcccaaatggcccgcgcgcaatctgattgaaaat
tgcacgtcgtacggcaatatcgatccggcggcaaacaacgcggacggcttcgcggccaaa
ctgacgtgcgcggacggcaacgtattccgcggctgtatcgcgtacggcaacatcgacgac
ggatgggatctgttcgccaaaatagaatccggtcccatcggcgcggttctgatcgaaaac
tgcatcgcgtacaaaaacggttcgctgcccgacggttccggcaacggagacggcaacggc
ttcaagctcggcggagacggaatcgccgttccgcacgtactgcgcaacagtatttcgttc
ggtaacggtacgagcggcattacgagcaactcggatccggcgattaagcttgaaaacgtt
acgtcgtacggaaacaaaggcgcgaacatcaatttgtacgggaaaggtaaagaaacggaa
cggcagttcgccgtttcaaacagtatttccatggaaggaatgagcgcggacgaatataag
gaaatgccttcgctcgccgcacccggaaactatttctggaacggcgcgcaaagcctgaac
tccgaaggccggcagctgacaccggacgtcttcgtcagtaccgatacggacatcgttccg
gttcggaaagccgacggctcgatcgacatgaaagggctgctcgaattgaccgacgcggcg
cccgccggagtcggcgcccgattctga
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