Treponema brennaborense: Trebr_2270
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Entry
Trebr_2270 CDS
T01489
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tbe
Treponema brennaborense
Pathway
tbe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Trebr_2270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbe03021
]
Trebr_2270
03400 DNA repair and recombination proteins [BR:
tbe03400
]
Trebr_2270
Enzymes [BR:
tbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Trebr_2270
Transcription machinery [BR:
tbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Trebr_2270
DNA repair and recombination proteins [BR:
tbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Trebr_2270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
DUF4758
Motif
Other DBs
NCBI-ProteinID:
AEE17679
UniProt:
F4LLN5
LinkDB
All DBs
Position
complement(2687694..2688746)
Genome browser
AA seq
350 aa
AA seq
DB search
MARKNLLKGFKKPKGITFEQLDSNPNYGKFTAYPFETGFGTTVGNTLRRVLLSSIQGYAI
TSVRITSYDADNVPHVISSEFETIPNVVEDTLEVLNSLKQIRLRLPGDAEQETFLFEFKG
PGTITSNDFSREGLEILSKDMLVFTMMENAHLEFEVQVDLGRGYTPAEVNEHYIEIVGTI
PMDAIFTPIPKVKYAIEPCRVGQRNDYDKLVIEIWTDGTISPEDALAEAAKIAKDHFAIF
VNFNDSEIGHDGELDEGDERIRQLLNTPVDELELSVRSSNCLKNANIRTIGELTKKTEDD
IAKTRNFGKKSLTEIKEKLLEWNLNLGMTDYSHLKDAVNLSKKKEESDES
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaatctgcttaaaggtttcaaaaaaccgaaagggattacatttgaacag
ctggactcgaatcccaattacggtaagtttaccgcttatccgttcgagacgggattcgga
acgactgtcggtaacactttgcgcagagtattgttgtcgtcgattcaggggtacgcgatt
acttctgttcgtataacgtcatacgatgccgataatgtgccgcacgtcatctccagtgaa
tttgaaacaattcccaacgttgtcgaagatactttggaagtcttgaacagcttgaaacag
atccgtttgcggctgcccggagacgctgagcaggaaacgttcctttttgaatttaaaggc
cccggtaccattaccagcaacgatttcagtcgcgaaggtcttgaaatcctttctaaagat
atgctcgtttttaccatgatggaaaacgcgcaccttgaatttgaagttcaggttgattta
ggaagaggatatactcctgcggaagtaaatgaacattatatcgaaatcgtcggtacgatt
ccgatggatgcgatttttacgcctattcccaaggtaaaatatgcaattgaaccttgtcgc
gtaggtcagcgtaacgactacgacaaactcgttatcgaaatctggacagacggtacaatt
tctcccgaagatgcgctcgctgaagctgcaaaaattgcaaaagatcattttgcgattttc
gtaaactttaacgatagtgaaatcggtcacgacggtgaactggatgaaggcgatgaacgt
attcgccaattgctgaacacacctgttgatgagctggaattgtcggttcggtcttcaaac
tgtctgaaaaacgcgaatatccgtacgatcggtgaactgacgaaaaagacagaagatgat
attgccaaaactcgtaactttggtaaaaagagtctcacggagatcaaggaaaaactgctt
gagtggaacttgaacctcggtatgactgattacagtcatttgaaagatgctgtaaattta
tcaaagaagaaggaagaatctgatgaatcataa
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