Treponema brennaborense: Trebr_2555
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Entry
Trebr_2555 CDS
T01489
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tbe
Treponema brennaborense
Pathway
tbe00040
Pentose and glucuronate interconversions
tbe01100
Metabolic pathways
tbe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tbe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Trebr_2555
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Trebr_2555
Enzymes [BR:
tbe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Trebr_2555
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AEE17959
UniProt:
F4LNY2
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Position
complement(3015804..3017150)
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AA seq
448 aa
AA seq
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MSRLRKIIMHGQGVFFAVCAALFCIGCVQLEAANDAESGGTVVSVEIRASDAPTGWASVG
AKSNFGGYGGSAVTVSDRAALIAAAKSGGKVIYVDGMIDMSGGMLPSVYDDSTAGLDALI
AEKTDGLYSTYASWRTAYAASCKDSADGSSDSALAGYQAALSKAWKAQIQLSVASNTTLI
GLTSDSGIAGGTISISGVSNIAVRNMTIRDAYDPFPDMEKNDGFNAEYDGICIQGTSSNI
WIDRCTFADSFSNFNKVKTGSGTPGVKWQTYDGLCDIKGNSRNITVSYCKFMNHDKTMLI
GSSDSESLSVTRTVTLHHNYYYNCVQRLPMVRMTNIHIFNNYYDADSASYANSYAIGVRK
NAAVYAEKNCFGCNIKYSYSGATGTSAKGSLFAAGDSDNSANKGRTDQFATLAAAPFSVP
YRYEAADADTLPAFIKANAGAGILPVVR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggttacggaaaataatcatgcacggtcagggagtgttctttgcagtatgcgcc
gcgctgttttgcatcggctgcgttcagttggaggcggcgaacgatgcggaaagcggcggc
accgtcgtttcggtggaaatccgtgcgtccgacgcgccgaccggctgggcttcggtagga
gcaaagtcgaatttcggcggatacggcggaagcgcggttaccgtatccgaccgcgccgcc
ctgatagccgcggcaaaatccggcggtaaagtaatttacgtcgacggtatgatcgatatg
agcggcggaatgctgccttccgtatacgacgacagtacggcgggactggatgcgcttatt
gcggaaaagaccgacggcttgtattcgacgtacgcttcctggcgaactgcgtacgcggcg
tcttgcaaagattcggccgacggttcttcggattcggcgttggccggatatcaggctgcg
ttgtcgaaggcgtggaaagcacagatacagctttccgtcgcgtccaatacgactcttatc
ggtttgacttccgactcaggtatcgccggcggtacgatcagcatatccggtgtgtcgaat
atagccgtacgcaatatgacgattcgggatgcatacgatccgtttcccgatatggaaaag
aacgacggctttaacgcggagtacgacggaatctgcattcaggggacaagttcgaacatc
tggatcgatcgttgcacgttcgccgattctttcagcaactttaataaggtaaagaccgga
agcgggactccgggcgtcaaatggcagacgtacgacggactgtgcgatataaagggaaac
agtcggaatatcaccgtttcgtattgcaaattcatgaatcacgataaaacgatgctcatc
ggttcctccgattccgagagcctgtccgtaacgcggacggtaacgctgcaccacaactat
tattataattgcgtacagcggctgccgatggtacgcatgacgaacatccatattttcaac
aattattacgacgcggattccgcctcgtatgcgaattcgtacgcaatcggcgtccgaaag
aatgcggccgtgtatgccgaaaagaactgttttgggtgcaatataaaatattcgtattcg
ggagcgacggggacgagcgcgaaaggcagcctttttgctgccggcgacagcgataattct
gcaaataaagggcgtacggatcagttcgcaacgctcgccgccgcaccgttcagcgttccg
tatcggtatgaagcggcggacgccgacacactgcctgcgtttataaaagcgaacgcaggt
gccggcattctgccggtcgtgcgttaa
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