Trematomus bernacchii (emerald rockcod): 117468612
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Entry
117468612 CDS
T09643
Symbol
syngap1b
Name
(RefSeq) synaptic Ras GTPase activating protein 1b isoform X1
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
tben
Trematomus bernacchii (emerald rockcod)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
RasGAP
C2
PH
PIN_8
PH_2
Motif
Other DBs
NCBI-GeneID:
117468612
NCBI-ProteinID:
XP_033968737
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MLDQEEVHPLLMRERRSESHRNKLLRRTVSVPVDGRQHPEMDHRARRKSIATGKQPSMEI
PPSAPIQPFRQSSFLSRRLKGSIKRAKSQPKLDRTSSFRHMILPRFRSADQDRTRLMQSF
KESHSHESLLSPSSAAEALDLTLDEDAVIKPVHSSILGQEYCFEVTTASGTKCFACRSAA
ERDKWIENLQRAVKPNKDNSRRVDNVLKLWIIEARELPAKKRYYCELCLDDMLYARTTSK
PRTDTVFWGEHFEFNNLPAVRNLRLHLYKETDKKRRKEKSTYLGLVSIPISSITGRQFVE
QWYPLIQPSVLTKGAGGGGGKIINASLRLKSRFQTMNILPMELYKEFAEYVTNNYRTLCA
VLEPVLSVKSKEEVACALVHILQSTGKAKDFLSDMAMCEVDRFIDREHLIFRENTLATKA
IEEYLKLIGHKYLKDAIGEFIRALYESEENCEVDPMRTPPSVLPDHQANLRMCCELALCK
IVNSHCVFPRELKEVFASWRVRCAERGREDIADRLISGSLFLRFLCPAIMSPSLFNLTQE
YPDEQTSRTLTLIAKVVQNLANFSKFGNKEEYMGFMNEFLEMEWGSMQQFLYEISNLDSV
SNAGGFEGYIDLGRELSILHSLLWEVIAQLSKQNSAKMVFLEPQDAIIKLGPLPRLLNDI
SMALRNPHLQRQPSHQTDRVVERQADRLLSRPSFNRGISSEFQNLMMRDLNSSIDITRLP
SPTSTGGVMPSRSQMNFQDRDHLHRVPSKDMFYVSRPPLARSSPAYCTSSSDITEPDPKN
PLFHLATADGPQQPQLHHQHSRAPPPAPLLLTPEPDPSHPNYMPQFAHGGFSRSEDLSTL
RTRDGHLGQPSIIHSHSYSDDYSRADYGRRQMSMHAQDNLQPQQQMMGIANQTGTSHSSL
AATPPTTVLPMRQSSVAPPPTQRVRSQTSHQLSVSAAAAPAALAKTRPPSANLLQSPETG
YAGRQHGPRQLSVKDNTAPGLPHQQSSVRENQSPQGTTTQSAQQSPQQQQQSQHLLKPTM
SKQGSQTPSTLNPPTPANERTVAWVSNMPHLSADVESSRIDREEFKLKEYSKSMDESRMD
RVKEYEEEITSLKGRLVMSHQKLEEYERRLLTQEQQTNKILLQYQNRLDDSERKLRAQQV
EKDSQIKGIISRLMAVEDEIRGGPMIETKTRIFPDQENQLSSLGYADPGVRTEGGGGGGG
GGGGRGGGGGGGALTDDQGLRVSSSGISSDSSPHNGVLPQTVDPPSLPTPHQHPSQNGEL
PGNQTSSPMTTSQATGTTATAATVIAEEGGVGQTQH
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgttggaccaggaggaggtacaccctttgctgatgcgcgagcggcgctcagagtctcac
aggaacaagctgctgcggcggacagtcagcgttcctgttgatggaaggcaacatcccgag
atggatcatcgcgcccggcggaagagcatagccactgggaagcagcccagcatggagatc
cctcccagtgccccaattcaacccttccgacaatccagctttctcagcagaaggttgaag
ggctcgatcaagagggctaagagtcagcccaaactggaccgaaccagcagtttccgccac
atgatcctcccccgcttccgcagtgccgaccaagacaggacccgtttgatgcagagcttc
aaagagtcgcactcccatgagtccttgctgtccccgagcagcgctgccgaagctctggac
ctcaccctggatgaggacgccgttatcaaacctgtccactcgagcatcctgggacaagag
tactgctttgaggtgactacggcatcgggaaccaagtgctttgcgtgtcgctcagctgca
gagagagacaaatggatcgagaacctgcagagagctgtcaagcccaacaaggacaacagc
aggagggtggacaatgtgctcaaactgtggatcatcgaggcccgcgagcttccagccaag
aaacgctactactgcgaactttgtctggacgacatgctgtacgcacgcaccaccagcaaa
ccccgcaccgacaccgttttctggggcgagcattttgagttcaacaacctgccagctgtc
cgcaacctacgccttcatctatacaaggagacagacaagaagagacgcaaggaaaagagc
acatacttaggactggtcagcatccccatctcgagcatcactggacgtcagtttgtggag
cagtggtacccgctcatccagcccagcgtcctcacaaagggagccggtggggggggcggg
aagatcatcaacgcatccctacgcctcaaatcacgcttccagaccatgaacatcctgccc
atggagctgtataaggagtttgcagagtacgtcaccaataactaccgcaccctgtgtgct
gtgctggagcccgtgctgagtgtgaagagcaaagaggaagtggcctgtgcgttggtgcat
atactgcagagcacagggaaagctaaggacttcctgtcagacatggcgatgtgcgaggta
gacagattcatcgaccgagaacaccttatcttcagagagaacactctggccaccaaagcc
atagaagagtacctcaaactgatcggacataagtacctcaaggacgctataggggagttc
ataagggccttgtatgagtcagaggaaaattgcgaagtggaccccatgagaaccccaccc
tccgtgctcccagaccaccaagccaatctccgaatgtgctgtgaactagcactctgcaag
atcgttaactcccattgtgttttccctcgagagctaaaggaagtttttgcctcgtggaga
gtgcgttgtgcagagagaggtcgggaagacatcgctgaccgtctcatcagtggttccctc
ttcttgcgcttcctgtgtcctgccatcatgtccccatcgctcttcaacctcacccaggag
tatcccgatgaacagacgtctcgcacactcacccttatcgccaaagtagtgcaaaacctg
gctaacttctccaagtttggcaataaagaagagtacatgggtttcatgaatgagttttta
gagatggagtggggctccatgcagcagtttctgtatgagatctccaacctggacagtgtg
agcaatgcgggcggctttgagggatacatcgacctgggcagggagctgtccatcctgcac
agcctcctctgggaggtcatcgctcagctcagcaagcaaaactcagccaaaatggttttt
cttgaaccacaggatgccatcatcaaactgggtcctttgccccgcctcctgaatgacatc
agtatggccttgcgtaaccctcacctccagaggcagcccagccatcagacagacagggtg
gtggagcggcaggccgacaggctgctgtcccggcccagcttcaacaggggcatctcgtcc
gagttccaaaatctaatgatgagggatctgaatagctctatagatatcactcgcttgcct
tcccccacctccaccggaggggtcatgccatcccgctcccagatgaatttccaggaccgt
gaccacctccatcgagtgccctccaaagacatgttttacgtatcccgtcctcccctggcc
cgatccagcccggcctactgcacgagcagctcggacatcacagaaccagaccctaagaat
cccctctttcatctggcgactgctgacgggccccagcagccacagctccaccaccagcac
agccgggctccacctccagcgccgctgctcctgaccccagagcccgacccctctcacccg
aactacatgccacagttcgcccacggggggttctctcgcagcgaggacctgtccaccctc
aggaccagggacggccacctgggccaacccagcatcatccactctcacagctacagcgac
gactacagcagggccgactacggacgcaggcagatgtccatgcatgcgcaggataacctc
caaccacaacaacaaatgatgggtatagccaaccagacaggaacctcacactcctccctg
gctgccacaccccccaccacagtcctacccatgcgccagagttctgtggccccgcctccc
acccagcgcgtcaggtcccagacgtcccaccagctgtccgtcagtgcggcagctgcacct
gctgctctggcaaagactcggccgccgagcgcgaacctcctccagtcgccggagacgggc
tacgccggcaggcagcacgggccccggcagctgtccgtcaaagacaacaccgccccgggc
ctgccccaccagcagagctctgtcagggagaaccagagtccgcagggaaccaccactcag
agcgctcaacagtcaccacagcaacagcaacagtctcagcacctgctcaaacccaccatg
agcaaacagggctcccagactccatccactctcaatcccccgaccccagccaatgagcga
acagtggcctgggtctccaacatgcctcatctgtcggctgacgttgaaagttcgcggatt
gaccgtgaagagttcaaactgaaggagtactcaaagagcatggatgagtcacgcatggac
agggtaaaggagtacgaggaggagatcacctccctgaagggccgcctggtgatgtcccac
caaaagctggaggagtacgagcggaggctcctcacgcaggagcagcagaccaataagatc
ctccttcagtaccaaaatcgactggatgacagtgagaggaagctacgggcacagcaagtg
gagaaagactcccaaattaaaggaataattagcagactcatggctgtggaggatgagata
aggggaggacccatgattgagacaaaaaccaggattttccctgatcaggaaaaccagctt
tcctccctgggttacgcagaccccggtgtgagaactgaaggtggagggggaggaggagga
ggaggaggaggaagaggaggaggaggaggaggaggagcgctaaccgacgatcaaggcctc
cgagtttcttcctcgggcatttcctctgacagctcgccccacaatggagtcctcccccaa
actgtagaccctccctctctacccactcctcatcaacatcctagtcagaatggagagctc
cctggcaaccaaacatcctcccccatgacaacctcacaggcaactggaaccacggcaaca
gcagctacagtcatagcagaagaagggggagtaggtcaaacacaacactga
DBGET
integrated database retrieval system
