Trematomus bernacchii (emerald rockcod): 117468667
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Entry
117468667 CDS
T09643
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03320
PPAR signaling pathway
tben04120
Ubiquitin mediated proteolysis
tben04137
Mitophagy - animal
tben04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117468667
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117468667
04137 Mitophagy - animal
117468667
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117468667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117468667
Ubiquitin system [BR:
tben04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117468667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Ubiquitin_5
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
117468667
NCBI-ProteinID:
XP_033968785
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaaaaccctcactggaaagaccatcaccttggaggtggaggcaagt
gacaccattgaaaatgtcaaggccaagatccaggacaaagaaggtatccctccagatcag
cagaggttgatctttgccggaaaacaattggaagatggccgaaccctgtccgactacaac
atccaaaaagaatccactcttcacctggtgctgcgtctccgtggaggtatgcagatcttc
gtgaagaccctcactggaaagaccatcacccttgaggtagagccaagtgacagcattgag
aacgtgaaggccaagatccaggacaaagaaggcatccccccagatcagcagaggttgatc
tttgccggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaaagaa
tccaccctccatctcgtgctccgtctccgtggaggcatgcagatcttcgtgaagaccctc
actggaaagaccatcacccttgaagtcgagcccagtgacagcattgaaaatgtcaaggcc
aagatccaggacaaagaaggcatccccccagatcagcagaggttgatctttgccggcaag
cagcttgaagatggccgcaccctgtccgactacaacatccagaaagaatccaccctccat
ctcgtgctccgtctccgtggaggcatgcagatcttcgtgaagaccctcactggaaagacc
atcacccttgaagtcgagcccagtgacagcattgagaacgtgaaggccaagatccaggac
aaagaaggcatccccccagatcagcagcgtctgatcttcgccggcaagcagcttgaagat
ggccgcaccctgtccgactacaacatccaaaaagaatccaccctccatctcgtgctccgt
ctccgtggaggcatgcagatcttcgtgaagaccctcactggaaagaccatcactctggag
gttgagcccagtgacagcattgaaaatgtcaaggccaagatccaggacaaagaaggcatc
cccccagatcagcagaggttgatcttcgccggcaagcagcttgaagatggccgcaccctg
tccgactacaacatccaaaaagaatccaccctccatctcgtgctccgtctccgtggaggc
atgcagatcttcgtgaagaccctcactggaaagaccatcacccttgaagtcgagcccagt
gacagcattgagaacgtgaaggccaagatccaggacaaagaaggcatccccccagatcag
cagaggttgatcttcgccggcaagcagcttgaagatggccgcaccctgtccgactacaac
atccagaaagaatccactcttcacctggtgctgcgtctccgtggaggcatgcagatcttc
gtgaagaccctcactggaaagaccatcactctggaggttgagcccagtgacagcattgag
aacgtgaaggccaagatccaggacaaggagggaatccccccagatcagcagaggttgatc
ttcgccggcaagcagctggaagatggccgcaccctgtccgactacaacatccaaaaagaa
tccactcttcacctggtgctgcgtctccgtggaggcatgcagatcttcgtgaagaccctc
actggaaagaccatcactctggaggttgagcccagtgacagcattgagaacgtgaaggcc
aagatccaggacaaagaaggcatccccccagatcagcagcgtctgatcttcgccggcaag
cagcttgaagatggccgcaccctgtccgactacaacatccaaaaagaatccaccctccat
ctcgtgctccgtctccgtggaggcatgcagatcttcgtgaagaccctcactggaaagacc
atcacccttgaagtcgagcccagtgacagcattgagaacgtgaaggccaagatccaggac
aaggagggaatccccccagatcagcagaggttgatcttcgctggcaagcagctggaagat
ggccgcaccctgtccgactacaacatccagaaggagtccaccctccatcttgtgctccgt
ctccgtggaggaaactaa
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