Trematomus bernacchii (emerald rockcod): 117468709
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Entry
117468709 CDS
T09643
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b
KO
K06781
cell adhesion molecule 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117468709 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117468709 (cadm1b)
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
Nectin family
117468709 (cadm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
C2-set_3
Adhes-Ig_like
Syndecan
Motif
Other DBs
NCBI-GeneID:
117468709
NCBI-ProteinID:
XP_033968829
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MAITGSGSLPIPLCVFVISVAFLSKGAAETVTVDGQNLATDNVSVIEGETATISCRVKNN
DDSVIQLLNPNRQTIYFREVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGNPIIESREDVVSEGNETELTCTAMGSKPAASIRWMKGEEELTGE
TTVEETYDRMFTVTSRVRFSVTKEDDGVPVDCIIDHPAVKDLLAQRHLEVLYKPEVKIVV
TYPDGLTREGDNLDLTCIAEGKPHPHQINWLRVDDDVPPHAVVTGSDLYIENLNKSYNGT
YRCVASNAVGEAYDDYILYVYDAPTTIPTPTTNPVNTQDSRASDGTPQKIDHAVIGGVVA
VVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNSDEKKEYYI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacgggaagcggatctctccctattcctctctgtgttttcgtgatttcagtg
gcgtttctttcaaaaggagctgctgaaaccgtgacagtcgatggtcagaacctggcaacc
gacaacgtgtcggtgatcgagggggaaacagccactataagctgcagagtgaagaacaac
gacgactccgttatccagctgctcaatcccaacagacaaaccatctacttcagagaagtt
cgacctctgaaggacagccggttccagctggtgaatttctctgacaatgaactgcgggtg
tctctgtccaatgtgtcactctcggatgagggacgctatgtgtgccagctctacacagat
cctcctcaggaagcctacgcagacatcactgtcctggtccctccaggcaacccaatcatc
gagagccgggaagatgtggtcagcgaggggaacgagacggagctcacctgcacagccatg
ggcagcaagccagctgcctccatcagatggatgaaaggggaggaagaactgacaggtgag
acaacagttgaggagacgtatgacaggatgtttactgtcaccagccgggtgagattttct
gtcaccaaagaggatgatggagtgccagtggactgcatcattgaccatccagctgtaaag
gacctcctggctcaacgacatttggaagtgctatataaaccagaagtgaagattgtggtg
acatatcctgacggcttaaccagagagggtgataatctagatttgacatgtattgctgaa
ggaaaaccacatccccatcagatcaactggctgagagtagacgacgatgtgccgcctcat
gctgtagtcaccggctctgatctgtacatcgaaaacctcaacaagtcttacaacggcacc
tatcgctgcgtggcgtccaatgctgtgggagaggcctacgatgactacatcctctacgta
tatgatgctcccactactatccccacacccaccaccaacccagtcaacacacaagactcc
agagccagcgatgggacaccgcagaaaattgaccatgctgtcatcggcggagtggttgcc
gtggtgatgtttgccatcctctgtgcactcattgttcttggtcgatactttgccagacac
aaaggaacttacttcacacatgaggccaagggggcggacgacgcagccgacgcagacacg
gccatcatcaacgcagagggtggacacaacaactcagacgagaagaaggagtactatatc
taa
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