Trematomus bernacchii (emerald rockcod): 117468716
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Entry
117468716 CDS
T09643
Symbol
cntn5
Name
(RefSeq) contactin-5
KO
K06761
contactin 3/4/5/6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117468716 (cntn5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
117468716 (cntn5)
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
Contactins
117468716 (cntn5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tben00537
]
Others
117468716 (cntn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_5
Ig_C17orf99
Ig_DSCAM-DSCAML_C
Ig_4
Pur_ac_phosph_N
C2-set
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
117468716
NCBI-ProteinID:
XP_033968842
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MKADSSSVLGSRSRPRQHHGGGLGTPDWPAFSSHPLSALSLLSSQENYRSEESEEFGPVF
IHEPGDVIFPLDSDEKKVMMHCEARGNPPPTYSWYINGTSLDAEADYRYSFIDGNLIITN
ASEITDYGRYQCKAENSFGNVLGREALLQFAYLGTFSGKTRGGVSVREGQGVVLMCTPPP
HSPEIIYSWVINEFPSFVAEDSRRFISQDTGNLYISKVQPSDVGSYICLVRNTVTNARVL
SPPTPLTLKTDGVMGEYEPKIEVHFPTSVLAAKGLTVRLECFALGNPVPTITWRKINGNI
PKKARLRKSQAVLEIPNIQLEDSGTYECKAENPRGGTAFKGHLQVYTLPQWVRMINDTQM
DSGEKLQWECKAMGRPRPTYHWLRNGLPLTSQGRMEIVNGELTIHRVQQTDSGMYQCVAG
NKYGSINSNAELKILASAPVFVHNPVRVIATLGKDILLECKPKASPKPRITWKRGDRRIQ
QSRRIMLLRNNTLRIVNSSRADEGNYVCRAENELGSAEMTAVLWVKEAMRVELSPIRVEV
TVGESVVLSCKAAHDTSLDVAFQWFFNQRPINFQQDGNHFEYIQTQSSTVDLMIRSILLK
HAGKYGCRAQTSADTVFTESELLVRGPPGPPGVVIVEEITDTTATLSWTRGLDNHSPIST
YNIQARSPFSLGWQTVQTDPDPVTGDMESAMAVELNPWVEYEFRVVASNAIGTGDPSAPS
RGVRSKEAVPKVAPSNVSGGNGRRHELVISWEPISEEFQNGEGFGYIVAFRANGTRGWKE
RMVTSADSTTYKYRDETFPPLTPFEVKVGVYNNKGDGPFSKEVIIRSAEGEPREAPSDVK
AYSFSSSEIRVTWKPPNPGPGRPRGYELSYWKDMEQEDLGKKQRTLKNETSMVLTGLEGN
SLYLITVKAFNSIGEGPATAAVTVNTRRAPPAQPPTNLMWIQEGNNVTLNWDPVKAKDNE
SDVIGYMVLLKQEGKGHNQVTRTINPSTMLSLPEGGTYIIEVRALSEGGEGAVSSQVRIV
TSSGVRAKSNQCSVHCMPQSLTWTALLLVLLVPLASW
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgacagctcgtcagtgctgggctctcgcagcagacctcgacagcaccacggt
ggtgggctggggactcctgactggcctgctttctccagtcatcccctgtcagccctgagt
ctgctcagctctcaggagaactacagaagtgaagaaagtgaagagtttgggccagttttt
atccacgagcctggcgatgttatctttcctttggattctgatgaaaagaaagtgatgatg
cactgtgaagcacgggggaatccaccgcccacatacagctggtacatcaatgggacatca
ttggatgcagaggcagactatcgctacagctttattgatggaaacttaattattaccaat
gccagtgagatcacggactatgggaggtaccagtgtaaagcagagaacagcttcgggaac
gtcctgggtcgagaagctcttctgcagtttgcatatctcggcactttcagtgggaaaacc
agaggtggcgtttctgtgcgtgaaggccaaggggtggtcctcatgtgtacccctcctcct
cattcaccagagatcatctacagctgggtgattaatgagttcccctcgtttgttgctgag
gacagtcggcgcttcatctcgcaggacacgggaaacctgtacatctcaaaggtgcaaccc
tctgacgtgggaagttacatctgtctggtgaggaacacggtgacgaatgccagggttctg
agccctccaacacctctaacactgaaaaccgacggtgtcatgggcgaatatgagcccaaa
attgaggtgcatttcccaacatctgttctggctgccaaaggactcactgtcagactggag
tgcttcgctctggggaaccctgtgccaacaatcacatggaggaagattaatggcaacatc
ccaaaaaaagccagactccggaagtcccaggctgtgctggagattcccaacattcaactg
gaggactcgggaacctacgaatgtaaagctgagaatccaagaggaggcactgcattcaaa
ggacatctccaggtctacaccctccctcagtgggtcagaatgattaatgatacccagatg
gatagtggagagaagctccaatgggagtgcaaggccatggggaggccccggcccacctat
cactggctgcggaatggtttgcccttgacatcccagggtcgtatggaaatagtgaatggc
gaactgaccattcacagagtgcagcagacggactcgggaatgtaccagtgtgttgcggga
aataaatacgggtccatcaactctaatgctgaactcaagattttagcatcggctcctgtc
tttgtccataatcctgtgcgggtcattgctacacttggaaaagatatattactagaatgt
aaacccaaagcatcgcccaaaccacggataacatggaagagaggagaccggaggatacag
caaagcagaaggattatgttgctacggaacaatactctgagaattgttaactccagccga
gcagatgaggggaactatgtgtgccgggccgagaatgagctgggctcggcggagatgact
gccgtattgtgggtaaaagaggccatgcgtgtggagcttagcccgatccgagtggaagtg
actgtgggggagagcgtggtgctgagctgcaaggccgcccatgacacctcgctggatgtg
gctttccagtggttcttcaaccagaggcccatcaactttcaacaggacggtaaccacttc
gaatacatccaaacacagtcttccacagtggacctgatgatcaggagcattttgttgaag
catgctgggaagtatgggtgtcgggcccagaccagcgccgacactgtgtttacagagtct
gaactccttgtgcgaggccctcccggcccccctggagtggtgatagtggaggagatcacc
gacaccacggccaccctgtcctggactcgtggcctggacaaccacagccctatcagcacc
tataatatacaggcccgcagcccattttcattaggctggcaaactgtccaaacagaccca
gacccagtgacaggagacatggagtcagccatggcagtggagctcaacccatgggtggag
tatgagttcagggtggtggccagcaatgccattgggaccggagatcccagtgcaccttcg
agaggagttaggtctaaggaagcagtcccgaaagtggcaccatcgaacgtcagcggaggg
aacggccgcaggcatgaactggtcatctcatgggagcctatatctgaggaattccaaaac
ggtgaaggctttgggtatatcgttgcatttcgtgccaacggaactagaggatggaaggag
aggatggtgacttcagccgactctacaacgtacaaatatagagacgagaccttccctccc
cttaccccatttgaagtgaaggtcggagtttacaacaataagggagatgggccgttcagc
aaagaggtcatcatccgttccgcagagggggagccaagggaagcaccatctgatgtgaaa
gcttacagcttttcttcatcggaaattagggtcacgtggaaaccgcccaatcctggccct
ggaagaccaagaggatatgagctcagctactggaaagacatggagcaggaggacttgggg
aaaaaacaaagaactttgaaaaacgaaacctccatggtcttgacaggactagagggcaac
agtctgtatctcatcacggtaaaagccttcaacagcatcggcgagggtcctgccaccgct
gctgtcactgtcaacaccaggagagcccctcctgctcagcctccaaccaacctcatgtgg
attcaagagggcaacaacgtgactttaaactgggatccagtgaaggcaaaggacaatgaa
tctgatgtcatcgggtacatggtgttacttaaacaggagggcaaaggccacaaccaggtg
accagaaccatcaacccttccaccatgctctcactgcccgagggagggacctatatcatt
gaggtgcgcgccctcagcgaagggggagagggggcggtcagctcccaagttcgaatagtc
acctcatccggtgttcgagcaaaaagcaaccagtgctcggtgcactgcatgccacagagc
ctaacatggacagccctgctcctggttcttctggtgcctttagcttcctggtga
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