Trematomus bernacchii (emerald rockcod): 117468769
Help
Entry
117468769 CDS
T09643
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117468769 (tbc1d8b)
Membrane trafficking [BR:
tben04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117468769 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
117468769 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
Ribosomal_60s
EF-hand_6
EF-hand_7
FUSC
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117468769
NCBI-ProteinID:
XP_033968931
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MWLKPDENLLKNAFKLWVTEEDNEYFVLQRRRGYGEGGGGLTGLLVGTLDTVLDSTSKVA
PYRILHHTPDSQVYWSIACGVTKEEITEHWEWLQQNIMRTLSVFDSSEDITSFVQGKIRG
LIAEEGKASLVLEEDPEKFREALFKFEKWFELPPQEKLVTYYSCSYWRGKVPCQGWLYLS
TNFLCFYSYLLGSEVKLIISWDEIWRLEKTTNVILTESIHVQAHGDNHYFSMLLHLNETF
VIMEQLANYSIKRLFDKEDFQREPALSDPLTITKRGLEAHAKSEQFRTFFRLPKEENLLE
VHESFLWVPFSHFNTLGKICLSENYLCFASQDGSQCHTIIPMREVINVEKSDPSSRALTV
CMRGKRALRFSEVRDYQRLANSLRSKCGISASPQHSASSEVIRGECQSLINHFDDNPEDV
TLMVGQKDSSKAVSTEALMMVFHPQDVENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFFT
RKTRDLIVRGVPEALRGELWMLFSGAVNDMATHPGYYTDLVEQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEDLIRENLPQLVEHMTDLCFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMEALISCHDDAEAVTILNKFFDSVTNKD
SPLPPTVQQASVGSNDKASHVSVDISELIREAYEKYGHIRSEEVETSRKRNKLHVIQTLE
DTTKQNVIRVVTQEVRFGASQLDEIYNLFKRQHFLCCYWRIQSPALLHHDPSLAYLDQYQ
LGFQQFSVLFSLLEPWAFCSPKSTLSLWVFRLIDENQDGLVNFKEFCYALDTLYGASFTN
KLKFLFKLHLPPAFTGSPLHLKDQSIQHLIPVTEDSSHLSRLAAFDLPEDGVIRKTPERG
RGKVDLQAYLKQWQNEILKKEETIKDLPRINQSQFIHFSKTLYNIFHGDPEEEPLYRAVA
HVTSLLLRMEEVGRRLQEPSSPPASTQPAAAAAAAAAAAAAAEPPTEEASSTLERSDTCS
STNSQEAETDWSFSFEQVLASLLNEPTIVNFFERPVDLQTKLGHARVAQLKLKWNK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaaaccggacgagaatttgctgaaaaacgcgttcaaattatgggtcaccgag
gaggataacgagtacttcgtactgcaaaggagacggggctacggagaaggtggaggcggg
ctgacaggccttcttgtgggaactctggacactgtgttggactccacatccaaagttgcc
ccctaccgtattctacaccacacaccagactcacaagtgtattggtcaatagcatgcggt
gtcaccaaagaggagatcactgagcattgggaatggctgcagcagaacatcatgaggacg
ctctctgtgtttgactccagcgaagacatcaccagctttgtacagggcaagataagaggt
cttatcgctgaagaagggaaggcctccctggtgctggaagaagatccagagaagttccga
gaagcactttttaagtttgagaagtggtttgagctgccaccgcaggagaagctggtcaca
tattactcatgcagctactggagaggcaaagtgccgtgccagggctggctctacctcagc
accaacttcctctgcttctattcatacctgctgggatctgaggtgaaactgatcatctcc
tgggacgagatctggaggctggagaaaaccaccaatgttatcctgactgagagcatccat
gtccaggcccatggggacaatcactacttctccatgctgctgcacctcaatgaaaccttt
gttatcatggaacagctggccaactactccattaagcgccttttcgataaagaggacttc
cagagggagccggcgctctccgaccccctgacgattaccaagagaggcctagaagctcat
gcaaagagtgagcagttccggacattcttcaggcttcccaaagaggaaaacctgttagag
gtgcacgagagcttcctctgggtgcccttcagccattttaacacacttggcaagatctgt
ctgtctgagaactatctgtgttttgccagccaagacgggagccaatgccacaccatcatt
ccaatgagagaggtcattaatgttgagaagtcagaccccagcagcagggctttaacggtg
tgtatgcgtggaaagagggcactgcgattttctgaggtgcgggactaccagcgcctggca
aactcgctccgaagcaagtgtgggatcagtgccagcccccagcactctgcatcatcagag
gtcatacgaggcgagtgccagtcgctcatcaatcacttcgatgacaacccggaggatgtc
acactgatggtgggacagaaagacagcagcaaggctgtaagcactgaggcgctcatgatg
gttttccacccccaggatgttgaaaacctcgaccccaaaatgcttaaagaaaagatgaag
gaacagtcttggaacatccacttctctgaatacggacgcggcacgagtatgttcttcacc
aggaagacacgagatctgatcgtccgaggtgttcctgaggccttgagaggagagctgtgg
atgcttttttcaggagctgtgaacgacatggccactcaccccgggtattacactgatctg
gtggagcagtccctgggcaccagcactctggctacagacgagatcgagagagacctgcac
cgctctctgccagagcaccccgccttccagagcgacacaggaatctctgctctacgcaga
gtcctcactgcctatgcttacaggaaccccaagattggctactgtcaggccatgaacatt
ctcacctcagttctcctgctctatgcgaaagaagaggaggctttctggctcctagtggcc
gtctgtgagaggatgttgccggattactttaatcggcgaattattggtgctctggttgac
caggcggtgtttgaggacctgattagagaaaacctcccccagctggtggagcacatgaca
gacctatgcttcttctcgtctgtgtccttgtcctggttcctcactctcttcatcagtgtc
ctgcccatcgagagcgcagtgaacgtggtggactgctttttctacgacggcatcaaagcc
attctgcagctgggcctggctgtgctggactacaacatggaggctctgatcagctgccat
gacgacgccgaggccgtcaccatcctcaacaaattcttcgacagcgtgacaaacaaagac
agcccgctgcctccgactgtacagcaagcttcagtgggaagcaacgataaagcctcccac
gtcagtgtggatatcagtgaactgatacgagaggcttatgagaaatatggacatatccgt
tcagaggaagtggagacttcgcggaaaagaaacaaactgcatgtgatccagacactggag
gacacaaccaaacagaatgtgattcgggtagtaacacaagaagtccgattcggagcctca
caacttgatgagatttacaacctgttcaaaaggcaacatttcctgtgttgctactggaga
atacagagtcccgctctgctgcatcatgaccccagcctggcctatctggatcagtaccag
ctgggcttccagcagttcagcgtgctcttctcgctgctggagccctgggccttctgcagc
cccaagagcaccctctccctctgggtgttccgcctgatagacgagaaccaggacggcctg
gtgaactttaaagagttctgctacgcccttgatactttatacggtgcatcgttcacaaat
aagctgaaattcctcttcaagctgcacctgccaccagctttcacaggtagtcctttgcac
ttaaaggatcaaagcatccagcacttaattccagtgactgaagactcttctcacttgagt
agactcgctgcatttgatctacctgaagatggtgtgataaggaaaactcccgaacgaggt
agaggaaaagtggacctgcaggcatacttgaagcaatggcaaaatgaaattcttaagaag
gaggaaaccatcaaagacctaccccggattaatcagtctcagttcatccacttctccaag
accctgtacaacatcttccatggcgatccggaggaggagcctctgtacagagccgtggcc
catgtgaccagcctcctgctgaggatggaggaggtgggccgaaggctgcaggagcccagc
agcccccccgcgtccacccagcctgctgctgctgctgctgctgctgctgctgctgctgct
gctgcggagcctccaacagaagaagcttccagcactttggagaggtcggacacctgcagc
tccaccaacagtcaggaggcggagaccgattggtccttttccttcgagcaggtcctggct
tctctgctcaacgagcccaccatagtgaacttcttcgaaaggcctgtcgacctgcaaact
aaactgggacacgctagggttgcccagctgaagctaaagtggaataagtga
DBGET
integrated database retrieval system
