Trematomus bernacchii (emerald rockcod): 117468799 Help Entry 117468799         CDS       T09643                                  Symbol robo1 Name (RefSeq) roundabout homolog 1 isoform X1   KO K06753   roundabout, axon guidance receptor 1 Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:tben04515]     117468799 (robo1) Cell adhesion molecules [BR:tben04515]  Immunoglobulin superfamily   ROBO family    117468799 (robo1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  I-set Ig_3 Ig_2 ig fn3 V-set C2-set_2 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Ig_C17orf99 Motif Other DBs NCBI-GeneID:  117468799 NCBI-ProteinID:  XP_033968985 LinkDB All DBs Position Unknown AA seq 1691 aa AA seqDB search MAGGQTPLLLLVLLAEVLSGLCVPVDGSGKHKGSWRWKGDRSRSRLRQEDTPPRIVEHPS DLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSQRMLLPSGSLFFLRIVHG RRSKPDEGSYVCVARNYLGEAASHNASLEVAILRDDFRQNPADVIVAAGEPAVLECQPPR GHPEPTISWKKDGVNIDDRDERITIRGGKLMITNARKSDAGKYVCVGTNMVGERESEIAE LTVLERPSFVRRPGSQVMLVDQSVEFRCEARGDPVPTVRWRKDDGDLPKGRYEIREDHTL KIRRLTSADVGSYTCVVENMVGKAEASASLTVHVVSVPPAFVVRPRNQVVGVGRTVTFQC EATGNPQPAIFWQREGSQNLLFSYQPPQPSSRFSVSQSGDLTITDAERSDMGYYSCQAIN TAGSVLTKALLEITDVVSDRPPPVIRQGPANQSVAVDGTVILNCVATGNPTPTILWRKDG VLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTCIASTPSGEASWKAYLEVHEFGVPVQPN RPTDPNLIPSAPSKPEVTDVTRTSISLSWRPNLNAGATPTSYIIEAFSHASGSSWQTLAE HVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPITEAVKTQDIPPTSQGVDHRQIQRE LGEVLIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSPQGLQRSEWAVFEVRTPG EDSAVVPQLRKGVTYEFKIRPFFDEFQGTDSDIKIGKTLEEAPSAPPREVTVTESEDNGT AIVVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGSVLSLLIPSLAPGIRYSVEV AASTGVGPGVKSDITFFQLDASGRMTETGIQENPLSQQISDVVKQPAFIAGIGAACWIIL MVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGGEGVSSAGRPGLLNIGESA TQPWLADTWPNSCSNHNDCSMNCCTAGNGNSDSNLATYSRPADCIANYNNQMENKQTNLI VPEAGVYGDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYATTQLIQSSIMGNHGNPD RGTGGSGGGLLGGGEMNEKHCWKPPSLQQQKQEMGSQMQYNIMEQNKLNKDRYRAGDSPM PATIPYNQTHDSHTGGSYNSSDRGSSSTSGSQGQKKGVRTPKLPKQSTMNWADLLPPPPA NPPPSRSTEEYSLSMDESCEPDMQCPMPPSHMYLQPDELEEEEEMERGPTPPIRGAASSP AAVSYSHQSTATLTPSPQEEMQPMLQDAPDSHERRRHTVSPPPLQMPHSPSHTYGYIPSP LALDTDGMDEDDDILEEEEEEGDETDSEVAKMHYHHTHPHTHPHHPQMHPRRLLLRGLEQ TPASSTGDLESSVTGSMINGWGSASEEDNVSSGRSSAVSSSDGSFFTDADFAQAVAAAAE YSGVRVAKYPHTLGPEVGGASARKYQINPSGHRPSSPVSTDSNMSMAAVHRRPPKKQKQH PAAHPAAHPVAHPAAHPAAHPGNQRREVYNEDLPPPPIPPPAVLKSPTHPSKAVLEGRGV SPKAVEGRDKRGGTGGYQPREGSDTRTSSSERREAQERQRTAHGGKGNKHEGSTASKARQ HAGSEDIQPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRRRGEGGRRNPADMSLNTTGAFQ PGDEESEMVES NT seq 5076 nt NT seq  +upstreamnt  +downstreamnt atggccggcggacagacgcccctgctgctgctggtgctgctggcggaggtgctgagtgga ctgtgtgtaccagtggacggctcagggaagcacaagggaagctggaggtggaaaggtgac aggagccgatctcgtctccgccaagaggacaccccaccccgaattgtggaacacccctct gacctgattgtctccaaaggggagcccgccaccctcaactgtaaagctgaggggcggcct accccgacagtggagtggtacaaggatggagagcgggtggaaacggacagggacaatccc cgttctcagcgcatgctgctgcccagtggctccctcttttttctacgcatcgtccacgga cgacggagcaagccggatgaaggttcctatgtctgtgttgcccgcaactacctgggagaa gcagcgagccacaatgcctctctggaagtagccattttacgtgatgacttcagacaaaac cctgcagatgtgatcgtggcggcaggagagccggcggtcctggagtgtcaacctccccgt ggacatcctgaacccaccatatcgtggaaaaaagatggagtaaacattgacgaccgagat gagagaatcactatacgcggagggaagctgatgatcacaaatgcccggaagagcgatgct gggaaatatgtgtgcgttggcacaaacatggtcggagaacgtgaaagtgaaatagccgaa ctcacagtacttgaacgtcccagctttgtccgtcgcccaggcagccaggtgatgttagta gaccaaagtgtggagttcaggtgtgaggctcgtggcgacccagttcccaccgtgcgctgg aggaaagacgatggtgacctgcccaaaggaagatatgagattcgtgaagaccacaccctg aagatccgtcgtctgacttcagccgatgtaggctcctacacctgcgtggtcgagaacatg gtgggcaaggcggaggcatcggcctcgctcaccgtccacgttgtgtctgtgccaccggct tttgtggttagaccaaggaaccaggtggtgggggttggcagaaccgtcacctttcagtgc gaagccactggaaacccacagccagccattttctggcagcgggaaggcagtcagaacctt ctgttctcctaccaacctcctcaaccatccagccgattttctgtatctcagtctggggac ctgaccatcacggatgccgaacgctcagacatggggtactacagctgccaggccatcaac actgctggcagcgtcctcaccaaggctctgctagagatcactgatgttgtgtcggaccgc ccgcctccagttatccggcagggcccggccaatcagtcagtagctgtggacggcacagtc atcctcaattgtgtggcaacaggaaaccccacccccaccattctgtggaggaaggatggt gtgttggtgtccacacatgactccagggtcaaacagctggacacaggcgcattacagatc cgctatgcaaagcttggtgacactggtacctacacctgcatcgcatctacaccgagtgga gaggcctcatggaaagcctacttagaggttcatgagtttggagttccagttcagccaaac aggcccactgacccaaacctgatccccagtgccccttccaaacctgaggtcactgatgtt acccgcacctccatctccctttcctggagacctaaccttaatgctggagccacgcccacc tcctatataatagaggccttcagtcatgcatcagggagcagctggcaaaccttggcagag catgtgaaaactgagtcatttgtactgaagggcttgaagcccagtgcagtctacctcttc ttagtacgggcagccaatgcctacgggctgagtgatcccagtcctatcactgaagctgtg aaaacacaagatatccctcccaccagtcagggcgtggaccatcgtcagatccaaagggag ttgggagaagtgcttatacaccttcacaacccaaccattctctcctcctcatctgtcagg gtgcagtggaccgtggagcagcagtcgcagtacatccagggctacaaggtgatgtacaga ccttcaccgcaggggctacagaggagtgagtgggctgtgttcgaggtgcgaacccccggg gaggacagcgctgttgtgccgcagcttcggaaaggagtcacatacgaattcaaaatccgc cccttcttcgatgagttccagggaacagacagtgatatcaaaattggcaagacgctggaa gaagcccccagtgccccgcctcgtgaggttacagtgacggagagtgaggacaatgggacc gccatcgtggtctcctggcaaccccctccagaagaggaacagaatggggtggtccaggag tacaagatttggtgcttggggaatgagagcaggtaccatatcaaccgcacagttgacggc tcagtcttatccctgctcattcccagtctggccccagggatccgctacagcgtggaggta gcagccagcaccggggtgggtcccggggtcaagagcgatatcaccttcttccagcttgat gcatctgggcgaatgacagagacagggatccaagagaaccccctttcccagcagatctcc gatgttgtcaagcagccggcctttatagccggcataggagctgcgtgctggatcatcctc atggtcttcagcatctggttgtatagacaccgaaagaagaggaatggcctctccagcagt tatgcaggcattcgcaaagttccgtcatttactttcacaccaaccgtggcatatcagaga ggaggagagggtgttagcagcgctggaaggcctggtttgctaaacattggggaatctgct acacaaccatggctggcagacacatggccaaactcctgctccaatcacaacgactgcagc atgaactgctgcactgcaggcaatggcaacagtgacagcaacttggcaacctacagccgc ccagccgactgcatcgccaattataacaaccagatggaaaacaagcagaccaacctcatt gtgccagaggcaggcgtctatggagatgtagacttgtccaacaagatcaatgagatgaag accttcaacagcccaaacctgaaagatggccgctttgtagggccggggggccagccgaca ccatacgccaccacccagctcatccagtcctccatcatgggcaaccacggtaaccccgac agaggaaccggaggcagtggaggaggcctcctgggtggaggggagatgaatgaaaagcac tgctggaagcccccctcactccagcagcagaaacaggaaatgggctcccagatgcagtac aacatcatggagcaaaacaagctgaacaaggaccgctacagagcaggtgacagccctatg cctgccaccatcccctacaaccagacccatgacagtcacactggaggctcctacaacagc tcggatcgaggcagcagtagcacctccgggagtcagggtcaaaagaagggagtgcgcacc cccaaactacccaaacagagcacaatgaattgggctgaccttctaccccctccccctgca aacccacccccaagtcggagcacagaggagtactcgctttccatggatgaaagttgtgaa ccagacatgcagtgccccatgcccccctctcacatgtacctgcagcctgatgagctggag gaggaagaggagatggagaggggccccactcctcccatccgaggagcagcctcttcccct gcagctgtatcttacagtcaccagtccacagccaccctcaccccctcaccccaggaagag atgcagccgatgctccaggacgcacctgacagccatgaacgcaggcgccacacagtgagc cccccaccccttcaaatgccccactctccttcacacacatatgggtacatccccagcccg ttggccttggacactgatggcatggatgaagatgacgatatattggaggaagaggaggag gagggtgatgagacagattcagaggtggccaagatgcactaccaccacacccacccccac acacacccccaccacccccagatgcatccacgaaggttgctgctccgagggcttgaacaa acgcctgcgtccagcaccggcgacctggagagctccgtcaccggctccatgatcaacgga tgggggtcggcttctgaagaggataatgtctcttcagggaggtccagtgccgtcagctca tcagacggatccttcttcactgatgctgactttgctcaagcggtggctgcagctgcagag tactcaggcgtcagggtggccaaatatccacacacactgggcccagaagtcggaggagcg tcagcacgaaaataccaaataaacccgtcaggccaccgtcccagcagcccggtgtccaca gacagtaacatgagcatggcagctgtacacaggaggcctcctaagaagcagaaacagcat ccagcggctcatccagcggctcatccagtggctcatccagcggctcatccagcggctcat ccaggaaaccagcgacgtgaagtctataatgaagatctccctcctccgcccatcccacct cctgcagtgctcaagtcacctacacacccgtccaaggcagtcttggagggccggggagtt tcccccaaagcagttgaaggtcgagacaagagaggaggaaccgggggctaccagcctaga gagggctcggacaccagaaccagctcctctgagcgcagagaggctcaggagagacaaagg actgctcatggagggaaagggaataaacatgagggtagcaccgccagcaaggctcgccaa cacgcaggttcagaggacattcagccctatagccgaccacagttccccacagtcaacagc ccccgggaccccagctcctccagctccatgtcttccaggggctcgggggggcggcggaga ggagaagggggccgcaggaaccctgcagacatgagcctcaacaccacgggggccttccaa ccaggagatgaagagtctgagatggtagaaagctga

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