Trematomus bernacchii (emerald rockcod): 117468847
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Entry
117468847 CDS
T09643
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03440
Homologous recombination
tben03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117468847 (brca2)
03460 Fanconi anemia pathway
117468847 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117468847 (brca2)
03036 Chromosome and associated proteins [BR:
tben03036
]
117468847 (brca2)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117468847 (brca2)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117468847 (brca2)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117468847 (brca2)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
117468847 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
117468847 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
RF-1
BChl_A
Motif
Other DBs
NCBI-GeneID:
117468847
NCBI-ProteinID:
XP_033969060
LinkDB
All DBs
Position
Unknown
AA seq
2982 aa
AA seq
DB search
MDLTLPSKNIYDTYKDEIWKELGPLDPDWFESLTAQTFTNEGHFYDQDDLCANQEGNFKT
PLDKSAVESQLFSTPKAFRRIRVVSPETGDDHSFTGEQERETLPWTTTQSPCLFQMSKRG
PGARNGRFQRFDPLHTPHKSPVSYSKHISESFGVQIHPDISWTSSLNTPPAEPSTLILTK
ADESPCPVGVSAEQDVVFVRKLFPSLSNPSKVEVVSPKNNGIPSVAQGVVSPEAGLDPES
HHSPQSSLNLSDSGWKEKLPDAIEDEDIRKTEASVLDGAEHVLSIFFSNSSSALRKVKSE
RIKRKQIIPTREHGCCSTDISSTNDKQRTADQEPGRLPSSPPVKTGDVGITQWSPLSLSE
IPPSTVEASCYDSTPATQVGNIILTEQLRSHSGQLVRPLLKLTDSGFTKKKRTFIYTVGT
SKPQVHGEGKRTQKMDSSPVIPDYGNKVNVTQSGKSQDEAYYCSMGKNEMQKWGNLAEDI
LPPSVQAKVQDLDMSQLCKEFAQDFSQSSDPRKLSKVAEDTPGNGFSPSACLSAVKRAKQ
KAIQAKLHHDCDGDSDSGFRSTVADCTHITASSFVHPSSEINDQSKPMPGFTSDICKIPP
FTSTNKGNDKDVLQETEMDAKLSSATKESQTLVPGRAIKLHTESTSAQLPSGAKGTEDII
YGIPFNGQACSSLPEKTTVSLPSVHASGFETASNKGIQISLANLQRAKHLFEETEGGKTQ
CDQPSKCVLDDKKEMSRGSVKNPTTNSNNPPSSSETNEDISCQLTASQKADVTELCTLLE
EADSQFEFTQFKTAKVKQHSQDKTTSPKKVEKEFDPDSLSGIDFDDSFSSEEKHLAVTVM
YEKRDLVPGGKTNCDTPNITSKSTGLLLSSAIKNENSSTEVASTTKGPRLILSTVHKTLD
RALHTDTSKLENNNPLLGVGFKTAGGNNLKVSKKCLSKARALFADLEENLVTSQTSPDKL
RRDPRTQHKTTVDNRKDSSLHDKLKESVCSEKLVTSIRDENAAQSFENIKMDTTCQRGFQ
MASGKGITITAKAMQEADVFFEDTMDFNDGLSVKHQKSTVPLPGSVSHNETLLNCKTVQG
IKVPEELINNPELINNPEHVNAGPAAPHTDVQQNVKILNVGFKNAPSFGDDAPFHENPST
AKALSSLSCTTSTSTGSSAINKSSNDVGFFTASGKKVSMSADALKKAESLLNEMNPLGDA
NQQLKQQGDALRTGHLTNNHIQVTAPKHCGFQTASGKGVAISSTALKKAKMLLSECDEVV
DEINVTPARSTMPVPGPQLGKSGFPAGSSKPVACSYEAIQKAKALFSDVSFSTEIPAVSD
TMNREKKQGNAENTKEMHCGFTTAGGAKVHVSHTNLLKAKHLLTEFDDGPISTRAMQEAD
TLFNDCDLMNRNNGRPVKQKRSIEPVSGSSSKKKNLSHFEQDEKMIINISEEPRMQNLPL
VVNHEKVQHPHDVETHKDDFKKTLDSIEVASLHGNPSLMSKPLSPTLCTTSKNISSSAVN
GLGKGGGFCTASGKKVSVSDSSITKAKSLFNESAIFEDTNKPKEETFPPMNGGFQTASGK
GVTISSSALKKAKTLLSDCEGVEDTPEHCKPPVPGPPPRSNGFLAASGKSVAFSSEALQK
ARALFSDISFSTEIPAVSDTRNSDKHQGHDEKTEKIHCGFTTAGGTKVNVSRKNLLKAQN
LLAEEADGKCHSSNSYSTCPQDTNIPDPSKVIDVKQTCKPSTDSGKHIFKSSTSLQNPEQ
ENETLRNPSLPDCIYFKDKAHTDTFQLKEGTTSPASAGNLHDSPEEEMSIGLDYETNRTS
NSKGCTVKRPQESSVLNAQSLDLSGCTETQQKFFAQEALDCTKALLDDESLAGQSLSMTL
ENMPLQENPKSSFRSAEERKGTGKRSVEDSDIAGQPPLKRRLLEEFDRTVDDPKGSRLCP
ETSCPKGVMKDRRVFKYSVSLHPNITRPPGGKNDIETRLQKMTPTQPSIPGDSRSSHPKM
PAFVPPFLRNAKTESQKNGVLKVNQGTPSAFVPPFKKQRTIVQESSSKPQEEEDNNLHLF
VTPFSSNTFVPTTKKAQSTTDVTGNKSKEDIQTVSLAGTTNISVNDQNVAVGCGSEDSSA
EASQVEDILSPSQDIFQNVPNVELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGASRTP
LKAAVNGKPPAIYTQKQLYGHGVNQHVCEITSETAESFRFNLQQFIRREALIEGGGVQLA
DGGWLIPSNDGTAGKEELYRALCDTPGVDPKLMSEAWAYNHYRWIVWKQASMERSFPESM
GSLCLTPEQLLLQLKYRYDVEVDHSRRPALRKIMEKDDTSAKTLVLCVCGVVSRGHSTNR
QSFSDTKTPPDAEAKVENPSAVVWLTDGWYAIKAQLDEPLTAMLHKGRVAVGGKLIIHGA
QLVGSQDACSPLEAPESLMLKICANSSRPARWDTKLGFHKDPRPFLLPISSLYSNGGPVG
CVDVIILRSYPIQWMERKTDGGAVFRSVRSEEKEARQHDSNKQKAMEILFAKIQAEFEKE
DKGNGRPQRRRRTISRQSIAGLEDGEELYEAVGDDPAYLEAQLSEQQVETLRSYRCSLME
KKQADLQDRFRRALENAEESEGSCPKRDVTPVWRLCLADLMDQPGSVYQLNFWRPSSDLQ
SLLKEGSRYKVYNLTTSDGKKHVGNTTVQLTGTKKTQFQDLPVSREWLSTHFQPRVSTHF
VDLQNTELQPQCGEVDLTGYVISIVDGQGFSPAFYLTDGEMNFVKVRCFSSFAQSGLEDL
VKPKVLLALSNLQLRGQSTSPTPVVYAGDLTVFSTNPKEVHLQKSLCQLRKLAQGQDSFF
TIAEEKLSHLGKPDGRSSFSSPALQTRSTAFTTVRRLDTSTSVTSQQPVRSLGSFTPVSR
KPPAAHCSTEKDPNSLKKRRALDYMSRIPSPPPLSPFGPVASPCVNTTFNPPRRSGTGTP
STLKTVQTPAQTPVETPVENEWVNDEELAMIDTQDLHVADLL
NT seq
8949 nt
NT seq
+upstream
nt +downstream
nt
atggatttaacgttaccctctaaaaacatttacgacacatacaaagatgaaatctggaaa
gagctgggccctctggaccccgactggtttgagtccctgacagctcaaacgttcaccaac
gagggacatttttatgatcaagatgacctgtgtgccaatcaagaaggaaactttaaaaca
cctttggacaaaagtgcagtagagagtcagctgttttcaaccccaaaagctttcagacgc
attcgagttgtgtcacctgaaactggagatgaccattctttcaccggtgaacaagaaaga
gaaacattgccatggacgacaacacaaagtccatgtttgtttcagatgtcaaagaggggc
ccaggtgctagaaatggaagattccagagatttgatccacttcataccccacacaaatcc
ccagtcagctacagcaagcatatatctgaaagtttcggagtacagattcatcctgatata
tcatggaccagttctctgaataccccaccagcagaaccatccaccctcattttaacaaaa
gctgacgagagtccctgtccagtaggtgtttctgcagaacaagatgttgtttttgtacgg
aagcttttcccttctctttcaaatccatcaaaagttgaagtggtgtcacccaaaaacaat
ggtataccttccgttgctcaaggtgttgtttcccctgaggctggtctggatccagagtcc
caccactcccctcagagttcactgaatctgagtgacagtggttggaaagagaagctacca
gatgctattgaggatgaagacattcgcaaaacagaagcaagtgttcttgatggagctgaa
catgttctctctatatttttcagtaacagtagttcagcactgagaaaagtcaaatcggaa
agaatcaaaagaaagcaaatcattccaaccagagaacatggctgctgctctacagacatc
tcgtcaacaaacgataaacagagaacagctgatcaggaacctggcagacttccttcatca
ccacctgtaaaaacgggagatgttggaattacccagtggtctccgttgagtttatctgaa
attccaccttctactgtagaggcttcttgctatgatagtactcccgctacgcaagtggga
aacattattttaacagaacaactgcggagtcactctggccagctagtcaggcctttgttg
aaacttacagactctggatttactaagaaaaagaggacatttatttacactgttgggact
tcaaaaccacaagttcacggagaaggaaaacggactcagaagatggactcatccccagtg
attccagattatggaaacaaagtaaatgtgacacagtcggggaaatcccaagatgaagca
tactattgcagcatgggaaagaatgagatgcaaaaatggggaaatctcgctgaagatatt
ctacctccctctgtacaagcaaaagtccaggatcttgacatgtcgcagctttgcaaagaa
tttgcacaagacttcagtcaatcgtcagacccccgtaaactgagtaaagtagcagaggat
actcctggaaatggcttctctccatcagcttgtctgtcagctgtgaaacgagctaaacag
aaagccatacaagcaaaacttcaccatgactgtgatggtgacagtgacagtggattccgg
tctacagttgcagattgcactcacattactgcatcatcatttgttcatcctagctcagag
attaatgatcaaagtaaaccgatgcctggttttacatctgatatctgcaagatccctcct
ttcacatctacaaataaaggaaatgacaaggatgttttacaagaaactgaaatggatgcc
aagctgtccagtgcaaccaaggaaagccagacactggttcctggcagagcaattaagttg
cacacagagagtacatcagcacaactacccagcggggcaaaaggaactgaggatatcatt
tatggcattccctttaatggtcaagcttgtagcagtctgccagagaagaccactgtttct
cttccttccgtgcatgcatcaggatttgaaaccgcttcaaataaagggatacaaatttcc
ttagccaacctacagagagccaagcatctatttgaagaaactgaggggggaaaaacgcaa
tgtgaccagcccagcaagtgtgtccttgacgataagaaagaaatgagtcgtggatcagtg
aaaaatccaaccaccaactcaaacaacccaccttcttcaagtgaaacaaatgaggatatc
agttgccagttaacagcttcacaaaaagctgatgtgactgagctttgcactctcttggaa
gaagcagatagccagtttgaatttacacagtttaaaactgcaaaggtgaaacaacacagt
caagataaaactacctctcccaaaaaagttgagaaagaatttgaccctgattcactttca
ggtatagattttgatgacagttttagttcagaagaaaagcatctggcggtaacagtgatg
tatgaaaaaagggacttagttccaggtggtaaaacaaattgtgatacacccaacattaca
agtaaatccacaggtcttttattgtccagtgcaatcaaaaatgaaaactcctcgactgaa
gttgcgtctaccactaaaggcccaaggcttattctttcaactgttcacaaaacccttgac
agagccctgcacacggacacaagcaagctggagaacaacaaccctttacttggtgtggga
tttaagactgcaggaggaaacaatttgaaagtttcaaaaaagtgtttgagcaaagctagg
gctttgtttgcagatttagaggagaatcttgtgacaagtcaaacctcaccagacaagctg
agacgggatcctaggacacagcacaagactactgtggacaatcgcaaggattcatctttg
catgataagttgaaggagtctgtctgttcagaaaaactggtcacaagcataagagatgaa
aatgctgcacaaagttttgaaaacatcaagatggacaccacgtgtcaacgtgggttccaa
atggccagtgggaaagggattactatcacagcaaaggctatgcaggaggcagatgttttc
ttcgaagacactatggactttaatgatggcctatcagtaaaacatcagaagagcactgta
ccgttgcctggaagtgtcagtcataacgagacccttctaaattgtaaaactgttcaaggg
ataaaagttcctgaagaactgatcaataaccctgaactgatcaataaccctgaacatgtg
aatgctggaccagctgcaccccatacagatgtacaacaaaatgtaaagattctaaatgtt
ggttttaagaacgcaccgtcttttggagatgatgcccctttccatgaaaacccgtcgact
gcaaaggcactttcatctctttcatgcacaacatctacgagtactggctcctctgccatc
aataaatccagcaacgatgttggcttttttacagccagtggaaagaaggtatctatgtca
gctgatgcactgaaaaaagcagagtcccttttgaatgaaatgaatcctcttggggacgca
aaccaacaactgaaacaacaaggagatgctttaagaacaggtcatctcaccaacaatcat
attcaggttacagcccctaaacattgtggatttcagacagccagtggcaaaggagtggcc
atttcatctacagctctcaagaaagcaaaaatgttgttgagtgaatgtgatgaagttgta
gatgaaatcaatgtgacaccagcacgttcaacgatgccagttcctggtccacaacttggg
aagagtggatttcctgcaggcagcagtaagccagtggcatgttcttatgaggccatccag
aaggcaaaagctctcttcagtgacgtcagtttcagtacagagatcccagctgtttcagac
accatgaatagagaaaagaaacaaggcaatgctgaaaatacaaaagaaatgcattgtggt
tttacaactgcagggggagctaaagtccatgtttcacatacaaatctattaaaagcaaaa
cacctcttgacagaatttgatgatggtcctatttcaacaagagcaatgcaagaggcagat
actttattcaatgactgtgaccttatgaatagaaacaatggcaggccagtaaaacaaaag
agaagtatagaacctgtgagtggaagcagcagcaagaagaaaaacctttcacattttgaa
caagatgaaaaaatgatcataaacatttctgaagagcctagaatgcaaaatctgccatta
gttgtgaaccatgaaaaggtgcaacatcctcatgatgttgagactcacaaagacgatttt
aagaaaacactggattctatcgaagttgcttctttacatggaaacccatctttgatgtca
aagccgctttctcctacattgtgcacaacttcaaagaacattagttcctctgcagtcaat
ggattgggcaaaggtggtggattctgtacagccagtggcaaaaaagtatccgtgtctgat
agctcgatcacaaaagcgaagtctcttttcaacgaaagtgctatatttgaggacacaaac
aaaccgaaagaagaaacttttccaccaatgaacggtggatttcagacagccagtggcaaa
ggggttaccatttcatcttcagcactaaagaaggcaaaaactctgttaagtgactgtgaa
ggagttgaggatacaccagaacattgcaagcctccagttcctgggccgccacccaggagt
aatggatttcttgcagccagtggtaagtcagtggcattttcttctgaggccctccagaag
gcaagggctctcttcagtgacatcagtttcagtacagagatcccagctgtttcagacaca
agaaacagtgataagcatcaaggccatgatgaaaaaacagagaaaatacattgtggtttt
acaactgcagggggaacaaaagtcaatgtgtcacggaaaaatctattgaaagcccaaaac
cttttagcagaagaagctgatgggaagtgtcattcttcaaactcatactcgacatgccct
caggacactaatataccagatccatcaaaggttattgatgtgaaacaaacatgtaagcct
tcaacagacagtggcaagcacatattcaaatcctcaacctctttgcaaaatcctgagcaa
gaaaatgaaactcttcgaaatccaagtctacctgattgcatttattttaaagacaaggca
catacagatacatttcagttaaaagaaggcacaactagcccagcatcggctggcaacctc
catgacagccctgaagaggaaatgtccattggtttggactatgaaacaaatcggacaagt
aacagcaagggatgtacggtcaaaaggccacaagagtcttctgttttaaacgctcagtca
cttgacctaagtggctgcactgaaacccagcagaagtttttcgcccaggaagctctggac
tgcactaaagctttgttagatgatgaaagtctagctggccaaagtctctcaatgacttta
gaaaacatgccactgcaagaaaacccaaaatccagcttcagatctgcagaggagcgaaaa
ggaacagggaaaagatcagtagaggactcagatatagctggtcagcctcccctgaaaagg
cgattactggaagaattcgacaggactgttgatgatcccaaaggttcaagactctgtccg
gagacaagttgtccaaaaggtgtaatgaaagaccgaagggtttttaaatacagcgtctct
ctccatccaaacattacaaggccacctggtggaaaaaacgatattgaaaccagattgcaa
aagatgacaccaacacagccatcgatcccaggagacagcagatcatcacatcccaagatg
ccagcgtttgttcctccattcctcaggaatgcaaagacagagagtcaaaagaatggagtg
ctcaaggtcaaccaaggaacaccttctgcatttgttcctccattcaaaaaacaaagaact
attgtccaagagagctcctctaaaccacaagaggaggaagataataacctccatctcttt
gtaacgcccttcagcagcaacacttttgtgccaaccactaaaaaagcacagagcactaca
gatgtaactggtaataaaagcaaagaagacattcagacggtgtccttggctggcactaca
aatataagtgttaatgatcaaaacgttgctgtgggctgtggatcagaggactcttctgcc
gaggcgtcacaagtggaagatatattgtccccaagccaagacatatttcagaatgttcct
aatgttgagctggcacgagatatgcaagatatgaggatcaggaaaaagaagcgccagacc
attcgacctttgccgggaagtttgtttcttaccaaaacctcaggggcttcgaggacaccg
ttaaaagctgcagtaaatggaaagcctcctgcaatatacacccaaaaacagctgtatgga
catggagttaatcagcacgtgtgtgagatcaccagtgagactgcagaatccttccgcttc
aatttacagcagttcatcagacgggaagcattaatagaaggaggtggtgtgcagcttgcg
gatggaggatggctaatccccagcaacgacgggactgcagggaaagaagagttgtataga
gcgttatgtgacacgcctggtgttgatcctaaactaatgagtgaggcgtgggcgtacaat
cactaccgatggattgtgtggaagcaagcctccatggaaagatcatttccagaatcaatg
ggcagtctctgtctcactccagagcagcttctccttcaactgaagtacagatatgatgta
gaggtggaccacagccgcagaccggctctgagaaagatcatggaaaaggacgacacatca
gccaaaaccctggtcctgtgtgtgtgcggggtcgtctccaggggccactccacaaaccga
cagagtttcagtgacaccaagactcctccagatgctgaagccaaggttgaaaacccatct
gcagttgtgtggctgacagatggatggtacgccattaaagcccagctggatgaacctttg
actgccatgctccacaaaggtcgagtggctgtgggggggaagctgatcatccacggggct
cagctggtgggatcacaggatgcttgctctcctctggaggcacctgaatctctcatgtta
aagatatgtgccaacagcagccgacccgcacgatgggatactaagctgggatttcacaag
gatccacggccattcctgcttcctatctccagtttgtacagcaatggaggaccggtagga
tgtgtggacgttattatcctgagaagctaccccatacagtggatggagaggaaaacagat
ggaggggctgtgtttcgctctgttcgttcagaagagaaggaggcgaggcaacacgacagc
aacaaacaaaaagcgatggagatcctgtttgctaagattcaagctgaatttgaaaaggag
gacaaaggtaatggcagacctcagcgtagaagacggacaattagtcgtcaaagtattgca
ggtcttgaagatggagaggagctgtatgaagcagtgggggatgacccggcgtatctggag
gctcaattgagtgaacagcaggtggagactctacgtagctacagatgttctctgatggaa
aagaagcaggctgacctgcaggatcgcttcagacgagctttagaaaatgcagaggagagc
gaaggtagctgtcccaagagagacgtcactcctgtgtggaggctctgcctcgcggacctc
atggaccaacctggcagtgtctaccagctgaacttttggcgaccttcctcggatcttcag
tctttactgaaggaaggcagtcgatacaaagtctataatctcacaacttcagacggaaag
aaacatgttggtaacacaactgttcagctgactgggacaaagaaaacacagtttcaggac
ctcccggtctctcgggaatggttatcaacacattttcaaccgagagtctctacccatttt
gtggatcttcaaaacacagaactgcagccgcagtgtggagaagttgatctcacaggatat
gtcatcagcatcgtagatggacagggtttctctccagcattttatctgactgatggggaa
atgaactttgttaaagtgcgctgtttcagcagctttgctcagtctggcttggaagatttg
gtaaagccaaaagttctgttggctctgagcaacctgcagctgagaggtcagtccacatct
cccacgcctgttgtgtacgctggagatctgaccgtcttttccacaaaccccaaagaggtt
catctgcagaaatctctctgccaactcagaaaactggcccagggtcaggatagcttcttt
acaattgctgaggagaagctttcacatttagggaaacctgatggcaggagttccttctct
tctccagctctgcaaacacgaagcacagctttcacaacagtcagaagactggacacaagc
acaagtgtgacatctcagcagccagtccgaagccttggatccttcacacctgtcagcagg
aagcctcctgcagcacactgctccacagagaaagaccccaacagcctgaagaagaggaga
gctctggactatatgtctcgtatcccgtcccccccacctctttccccgtttggcccagtg
gcttctccatgtgtaaatacgacattcaacccccctcggaggtctgggactgggacacct
agcactttaaaaactgtacagactccagctcagacacctgttgaaactccagtggagaat
gagtgggtgaatgacgaggaactagctatgattgacactcaggacttacatgttgctgat
ctactgtag
DBGET
integrated database retrieval system
