Trematomus bernacchii (emerald rockcod): 117469071
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Entry
117469071 CDS
T09643
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117469071 (scfd1)
Membrane trafficking [BR:
tben04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
117469071 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117469071 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Peptidase_S66
PS_pyruv_trans
DUF3882
Motif
Other DBs
NCBI-GeneID:
117469071
NCBI-ProteinID:
XP_033969342
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MAASVREKQTVALKRMLNFNAPPLKNSAAEPVWKVLIYDRFGQDIISPLLTVKELRDMGI
TLHLLLHSDRDPIPDVPAIFFVMPTEENIDRICQDLRNQLYESYYMNFISAISRSKLEDI
ASAALAANAVTQVTKVYDQYLNFITLEDDMFTLCHQNKELISYHAINRADIQDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMATGQ
FSFQRPLFVLADRNVDMATPLHHTWTYQALIHDVLDYQLNRVVMEEGAGGDPSPAGARPK
KKNRKTYDLTGADRFWQKHKGSPFPEVAESVQEELDTYRTQEDEVKHLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTPEDKMRLFLIYYITAQQAPSESDLEQYKTALLDAGCDLSPL
NYIKQWKAFTKMAATPANYGNSGVKPMGLFSRVMNSGSQLVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
AKFKQGKKVVYGCSEVSNAGQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgtccgggagaagcagacagtcgccctgaagcggatgctgaacttcaac
gctcctcctctgaagaactcagcagcggagccagtatggaaggtgttgatctacgacagg
tttggccaggacatcatctcccctctgctgaccgtcaaagagctgagagacatgggcatc
actctgcaccttctgcttcactcggacagagatccaatcccggacgttcctgccatcttc
ttcgtcatgcccacagaggagaacattgacaggatatgccaggacctgaggaaccagctg
tacgagtcgtactacatgaacttcatctctgccatcagcaggagtaaactggaggacatc
gccagcgccgctctggctgctaacgctgtcactcaagttaccaaggtgtatgatcagtac
ctgaacttcatcactctggaggacgacatgttcaccctctgccatcaaaacaaagagctc
atctcctaccacgccattaacagagcagacatccaggacacagacatggaggccatcatg
gacaccatcgtggacagtctcttttgtttcttcgtcactctgggtgcagtaccgatcatt
cgctgtccccgtggaaacgcagctgagatggttgccgtgaagttggataagaagctcaga
gagaacttgcgggatgccagaaacagtctcttcacgggagacaacatggccaccggacaa
tttagtttccagaggcctctgttcgttctggcggatcgtaacgtggacatggccacgccc
ctccaccacacctggacctatcaggcgctgatccacgacgtcctggactaccagctgaac
agggtggtgatggaggagggggcggggggggatccgtctcctgccggcgccagaccaaag
aagaagaacaggaagacgtacgacctgacgggagccgacaggttctggcagaaacacaag
ggcagtccgttcccagaggtggccgagtcggtccaggaggagctggacacgtaccggacc
caggaggacgaggtcaaacacctgaagagcatcatgggtttagagggagaggatgaagga
gccatcagcatgctgtcagacaacacagccaaactcacctctgctgtcagctctctgcct
gagctgctggagaagaagcggctgatcgatctgcacaccaacgtggccaccgccgtcctc
gaccacatcaagagtcgcaaactggatgtttactttgagtatgaagagaaactgatgagc
aagtcgaccttagacaaatctctgctggacatcatcagtgacccagatgccgggacccct
gaagacaaaatgagacttttcctcatttactacatcactgctcagcaagctccttcagag
tcggacttggagcagtataagacggctctgttggacgccggctgtgacctctcacctctc
aactacatcaaacagtggaaagcgtttaccaagatggctgcgaccccggccaactacggc
aacagtggagtcaaacccatgggcctattctccagagtgatgaattctggatcccagtta
gtcatggagggagtgaagaacctggtattaaaacaacataaccttcctgtcactcggatc
ctggacaacctgatggagatgaagtcaaaccctgaaacagacgactatcgatacttcgac
ccaaagatgctacgaggcagcgagagctctattcccaggaacaagaacccgtttcaggag
gccatcgtgtttgtggtcggagggggaaactacatcgagtaccagaacctggtggactac
gctaagttcaagcaggggaagaaggtagtttacggctgcagcgaagtctccaacgctggt
cagttcatcaagcagctctcccaactcggccaaaagtaa
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