Trematomus bernacchii (emerald rockcod): 117469111
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Entry
117469111 CDS
T09643
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117469111 (snapc4)
03021 Transcription machinery [BR:
tben03021
]
117469111 (snapc4)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
117469111 (snapc4)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
117469111 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
117469111
NCBI-ProteinID:
XP_033969380
LinkDB
All DBs
Position
Unknown
AA seq
1559 aa
AA seq
DB search
MSVSLSAERDRIQRQVEELEQSLSATNADLQLLSCETDESDAEDSEEEGSQSAADLLAER
ERIQQEIQNLENVLGEQSPECETVSDADDSSSEESELGVPPSPEGCLQMNLVYQQVLQET
LQQLEELLTNNNRQQKELVSQLSGPIRERPQEQPASSSCQQSVGMYLGRFLKPYFKDKLT
SMGPPANQEAREKASRMSGCLDEKQLKIKRWESWQKTLLIHSVSRDSLRKLIQPKLSRVD
YLSQKLSSAAETDKQPIREQIDRLERDIDLLRGKKEEELIGDRYDEHDWQKISNIDFEGT
RDSEDIRLFWRNFLHPAVSKAAWSKEEVEELREASRRHEERHWESIAEELGTGRTAFLCL
QTYQRFVSVSLKRGCWMPEEDAQLRELVEKMRIGNFIPYTQMSYFMEGRDPAQLIYRWNQ
VLDPSLKKGFWSKEEDELLLYAVSRHGEKDWWKIRLEVPGRTDSGCRDRYYDCLKAEVKK
GVFDQQETGLLLMLVHKHGVGRWARIAAEIPQRNDAQCMRTWRKMSGTMPVRPLKKNSTT
KNVTGRRAPAQKVAPTRKRVRRRPPVQKEKEKEEEEEEEEEDDEEEEDEEEVLVVPYMDS
DEEKLVKKKKKKQVKKKKKQEVVQLEEEQEFTPPPMQEWIPVDKACASCLRFSPVDPPPP
GAPPAPMVRSTLLEGPGASSLLGPPPTERRGSSLLMVSEQQLRARLLQHVGPPSMRLSFE
LQEAVAPWLGNLLLRRRCSVAHSLRSSRPPSSPLFLLLLQAMRVDATGCREVIRQRSSGG
VQLAPPPSSPAPSPRANFVSGILQLRSIKEEQQEKLIHTQTRPRGLLQRPPQAILPPSPL
NPPLPLFSVLPLPLNATLLPPSPAPCPPPVGRSEGVMVAGGSQKTGALQETQAEDGQEAT
PPPSVPTNQRSAPCPLPPFPVDHEYASSVLPPCSLKPDSSTTASPRKWEIEGEMSSGTGV
MSHQNGTGVMSHQDGTGVMSHQDGTGVMSHQDGTGVMSHQDGTGVMSHQDGTGVMSHQNG
TGVMSHQDGTGVMSHQDGTGVMSHQNGTGVMSHQDGTGVMSHQDGTGVMSHQDGTGVMSH
QDGTGVMSHQDGTGVTPPRGKRVRNLTPRAMALQEETRAKDEARRKRRASSPRKKRSHSS
KQEVVPVPPLPFYLQPMLVLTPNGLVQMAQAPPPGPQLTQAPPPGPQLTQALPLTKAPPP
FLQLTQAPPPGLQLKHAPPPFLQLTQAPPPFLQLTQAPPPFLQLTQAPPPSLQLTQALPL
FLQLTQALPLTQAPPPFFQLTQSQPPGLQRTQAPPPRLQRTQAPPPFHQLTQASSPIIKP
LPNHFLPYKGAAVLQFDSSLMFLESQEEVHDWLSGRGGVAAPGGRGLPYLPPSVSSVRSL
SALLRARRSLNSCTKLLSRRPTPRGPPATPEMGGGRLGSTLPLRDTQDAAAPSVPPEEEA
ELAKKAELVKEAELVAVTRQLVAERFSGNPAYQLLKARFLSCFTVPALLASLQPITKKTV
PEEEEEEEDEEEEIEEVLKRIKGGKRRGRRSVLLEDGPGAPANHFSGIQTNPDLQDTVH
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttctctgtcagcagagagagacaggatccagcgacaggtggaggagctggaa
cagagtctgtctgcaaccaacgctgatctacagctgctgagctgtgagacagatgaatcg
gatgcagaggactcagaggaggaggggagccagtctgcagctgatctgttggctgagaga
gagagaatccagcaggagatccagaacctggagaacgtgctgggagagcagagtccagag
tgtgagacagtttcagatgcagacgacagcagcagtgaggagagtgagctcggcgtcccc
ccctcccctgaaggatgtctccagatgaacctggtgtatcagcaggtccttcaggagacg
ctgcagcagctggaggagctgctaacaaacaacaacagacagcagaaggagctggtgtct
cagctgtctggaccaatcagagagcgccctcaggaacagcccgcctcctcgtcctgtcag
cagtccgtcggcatgtacctgggacgcttcctcaaaccgtacttcaaggacaagctgacc
agcatgggtcctccagccaatcaggaggcgagagagaaggccagcaggatgagtggctgt
ctggacgagaagcagctgaagatcaaacgatgggagagctggcagaagaccctgttgatc
cactcagtatccagagacagtctgaggaaactcatccagcccaaactctccagggtggac
tacctgagccagaagctgtcctcagcagcagagacagacaagcagccaatcagagagcag
atagaccgtctggagagagacatcgacctgcttagagggaagaaggaggaggagctgatt
ggtgatcggtacgatgaacatgattggcagaaaatctccaatattgatttcgagggcacc
agggactcggaggacatccggctcttctggaggaacttcctgcacccggccgtcagtaag
gccgcgtggagcaaggaggaggtggaggagctgagggaggccagcaggaggcatgaggag
agacactgggagagcatcgctgaggagctggggacggggaggacagccttcctgtgtctt
cagacctatcagcggttcgtctcggtctcgttgaagcgaggctgctggatgccggaggaa
gacgctcagctcagagagctggtggagaagatgaggatcggaaacttcatcccctacacc
cagatgagttacttcatggagggccgtgacccggctcagctgatctacaggtggaaccag
gtgttggacccgagcctgaagaaaggcttctggagcaaagaggaggacgagctgctgctg
tacgccgtgtcccggcacggggagaaggactggtggaagatcaggctggaggttcccggg
cgcacagactccggctgcagagacaggtactatgactgtctgaaggcggaggtgaagaaa
ggagtgtttgaccaacaggagacaggtctgctgctgatgctggtgcacaaacacggagtc
gggcgctgggccaggatagcagcagagatccctcagcgtaacgacgctcagtgcatgagg
acgtggaggaagatgagcggaacgatgcctgtgcgtcctctgaagaaaaactcaacaaca
aaaaatgtcacaggcaggagggcgcctgcgcagaaggtggcgccgaccaggaagagagtc
aggaggaggccgccggtgcagaaggagaaagagaaagaggaggaggaggaggaggaggag
gaggatgatgaggaggaggaggatgaggaggaggtgctggtggtgccgtacatggacagt
gatgaagagaagctggtgaagaagaagaagaagaagcaggtgaagaagaagaagaagcag
gaggtggtgcagttggaggaggagcaggagttcacccccccgcccatgcaggagtggatc
ccagtagataaagcatgcgcctcctgcctcaggttctccccggtggaccctccccccccc
ggagccccccccgccccgatggtccgctccactctgctggagggccccggcgcctcctcc
ttgttgggccccccccccacagagcgcagaggctcctccctcttgatggtgtcggagcag
cagctgagagcccgcctcctccagcatgtcggccccccctccatgaggctgagctttgag
ctgcaggaggcggtggctccgtggctcgggaacctcctgctgaggaggaggtgcagcgtg
gcccacagcctgaggagcagccgccccccctcctcccccctcttcctgctcctcctgcag
gccatgagggtggacgccaccggctgcagggaggtgatccggcagaggagcagcgggggg
gtgcagctggccccgcccccctctagccccgccccctccccccgcgccaactttgtgtct
gggattctgcagctgaggagcatcaaggaggagcagcaggagaaactgatccacacacag
actcgccccaggggtctccttcagaggcctcctcaggccatcctgcccccctcccctctg
aacccccccttacctctgttctctgtgctaccgctgcccctgaacgccacactcttaccc
cccagcccagctccctgcccgccccctgtgggccgcagtgagggtgtgatggtggccgga
gggagtcagaagactggagctctgcaagagacccaggctgaagacggacaggaagcgacc
ccgcccccctccgtaccgaccaatcagcgctctgctccctgtcctctacctcccttcccc
gtcgatcatgagtacgcctcctctgtcctccccccctgctcactgaaacctgactcctcc
accactgcctcccctaggaagtgggagatagagggggagatgagcagtgggacaggtgtg
atgagtcatcagaatgggacaggtgtgatgagtcatcaggatgggacaggtgtgatgagt
catcaggatgggacaggtgtgatgagtcatcaggatgggacaggtgtgatgagtcatcag
gatgggacaggtgtgatgagtcatcaggatgggacaggtgtgatgagtcatcagaatggg
acaggtgtgatgagtcatcaggatgggacaggtgtgatgagtcatcaggatgggacaggt
gtgatgagtcatcagaatgggacaggtgtgatgagtcatcaggatgggacaggtgtgatg
agtcatcaggatgggacaggtgtgatgagtcatcaggatgggacaggtgtgatgagtcat
caggatgggacaggtgtgatgagccatcaggatgggacaggtgtgaccccccccagaggg
aagagggtgaggaacctgacgccgagggccatggctctgcaggaggaaaccagggccaag
gatgaagccaggagaaagaggagagcttcttctcctcgtaagaagcgctcccattcctct
aaacaggaagtggtcccagtaccccccctccccttctatctgcagcccatgttggtgttg
acccccaatgggctggtccaaatggcacaggccccgccccctggcccacagctaacacag
gccccgccccctggcccacagctaacacaggccctgcccctaacaaaggccccgcccccc
ttcctccagctaacacaggccccgccccctggcctacagctaaaacacgccccgcccccc
ttcctacagctaacacaggccccgccccccttcctacagctaacacaggccccgcccccc
ttcctacagctaacacaggccccgcctcctagcctgcagctaacacaggccctgcccctc
ttcctacagctaacacaggccctgcccctaacacaggccccgccccccttcttccagcta
acacagtcccagccccccggcctacagcgaacacaggccccgcctcctagactgcagcga
acacaggccccgccccccttccaccagttaacacaggcctcgtcccccatcattaagccc
ctccccaaccactttctgccatataagggcgcggcggtgctgcagtttgactcctccctc
atgttcctggagtcgcaggaggaggtgcatgattggctgagtgggcgagggggcgtggca
gctcctggggggcggggcctcccttacctaccgccctctgtcagcagtgtgaggtcactc
agtgcgctgctgagggcccgcaggtctctgaacagctgcacgaagctgctcagcaggagg
cctacgccccgaggcccccccgccacacctgagatgggaggggggcgtctgggctccacc
ctccccctcagagacacgcaggacgctgcagccccctccgtcccccccgaggaggaggcg
gagctagcgaagaaggcggagctagtgaaggaggcggagcttgtggcagtgacacgtcag
ctggtggcagagcgtttctcaggtaaccccgcctaccagctgctgaaggcgcgcttcctg
tcctgcttcactgtgcccgccctcctcgccagcctgcagccaatcacaaagaagactgtg
ccagaggaggaggaggaagaggaggatgaggaagaggagatagaggaggtgttgaagagg
atcaaaggaggaaagaggagaggaaggagatctgtcctgctggaagacgggcctggagct
ccagccaatcacttctcagggatccagacaaatccagaccttcaggacactgtccactga
DBGET
integrated database retrieval system
