Trematomus bernacchii (emerald rockcod): 117469239
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Entry
117469239 CDS
T09643
Symbol
ppl
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117469239 (ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117469239 (ppl)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117469239 (ppl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
SR_plectin_7
Spectrin
ERM_helical
Motif
Other DBs
NCBI-GeneID:
117469239
NCBI-ProteinID:
XP_033969513
LinkDB
All DBs
Position
Unknown
AA seq
1758 aa
AA seq
DB search
MFKKKSKTTAITQPQTSAPSTELSALIDKLQKNADKVEKNSYDIEQNLNKDVSKINEGKQ
PLYQDDTNKRILVSLELLNGLDDDAVNAKRLQHPQAEMIEKDMRQLREKVMKLKEDHDRI
YHLTRTEGLPSINWGNMMDEKLDNLNNKAFGQDLPSVENEVEEHNIFHSEVEALAPHISS
GGDKEYVSSLQMKYAKLLASSSSRQRHLLGLRDYMQRCTNELYWMDQQAEERVNYDWSDT
NLDYPARQRQYENFIGKCLESKEATITKLNDDGEKLIASDHPGKNVIEAHTEAVHADWKE
YLNLLICEENHLKYMDEYHKYHKEARDTQDLLKRMDTELSQKYNPEFKDVYQMEGLIREL
DDQAKAMDHFDDRVKALQKRGLQVSPLKYRRETPPKMLPVEALCEFDTDDGAILRGERYT
LLRNNGTKWDVKDAAGHQLTAPAVCFMVPPTDPEAVAVSDNLAGQQKSVKQRISGSKTVL
AKRFEELQKASGTGTTDKQEQQCRQLMAGMDKVVSDLDKQEKAIQARVRPPLEQTRPLQD
SADRLQDMRDIAAAVSKIEPEKSSKVQESKSFLVSNPTCASAPQLHSKVDEASKKFSNIE
QLLQSSQEKLKNSNQLETSLQNGKTLLSSYENKLAREEVAPSDISSLEKTQRELGDIASD
LRTKRSVIAETEQSLRLAKSSCDTMATKFQEHCPDIERQEADVQKLNKRFNNLNRQTDTR
SQSLQRAKMSYSNYRNDYDNLNNWLSRVPNYEPNETDNSSQVETKLKNQRNLLSDIARKE
SELNNVSKNAQLYQQAIKDYENETEKFRSILDLEDGLVPQTYKRNRLESPALIVKAEEAA
IEAKFTEVNAVNKQRLQSLEFTQSLLNQQPEISMIQATNVKSVNSSVSGEEPWRIKKQLD
DEVQRREQLEREIETIQTDIYVLEGQRPQDTIVKKELIKKVPDPQLDEEVHKVQQKLSEE
RRTTHVMENDLEVLKLKLRGLDTELKEGAQQYTVKEVLRIERDRGQEEEMRKLREELDEL
RRNKLMKDNELILIQKQVTLLAEEKNKEQEVITEEEVIKVQNDPQLETEYRVLLDRKQKA
IDGRKQLEDELQFLQEKLRRMEKEKSMAEEKISIKEVLKVEKDVAFEREVENLRKQYEDE
KAKRRSSQREKTDLQRKITSLEEEKSKVVIQEKMREIVRPDPKAENEVANLRLELVEQQR
RYRDSELQIRTLQDEHTTLRNRGPQVEIKEIIKEVIKYKTDPQTERELERLRNEIVDKTH
QTEKSEMEIRQLRDEIQRWKDTKPQVQTKEVVNEVLQYREDPKTKEEIETLKRKLADEQK
KRLDLEGERSVQEEKIRLRKIDLSQVREKVVQQEVVKMEEDPILRSECDTFLQNINNEQK
QKDSLKTELYQLQRQKADLDLQLEELERERRARRDAELEIQRLRVTLNELEIRDKENREK
VTVKQKVVLQQDPQQEKEHSILRLQLDEEKHKRTLLEKELNVLIQQQITLEKMDVKERVV
RTEKVQVERDPEAEIEIENLKKTLEEEKRRRRELDQEFTTLTSRLSDMEFSSTKSSKELH
YIRDESSRLQQENQRLQNEIRKIRSEIDITSKETRLITESAPRDDGKNLELRLDSLQREL
AELRGITTQKDEEVERLQKNLVAVRQKKEQRESHLRRSIVIIDPDSGKEMRPEEAYKLGL
IDWKMFVNLQSQECDWEEISVKGPKGESSVLHDRKSGKKFSIDDALRLGHITNHQLQQYM
NKEITIQEFGVMVSGKTM
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaaagagcaagaccacggcgataacacagcctcagaccagcgctccgtcc
acagaactcagcgctctgatcgacaagctgcagaagaatgctgacaaagtggagaagaac
agctatgacatcgagcagaacctcaacaaggatgtgagtaagatcaacgaggggaagcag
cctctgtaccaggatgacaccaacaagagaattctggtgtctctggagctgctgaacggg
ctggacgacgacgcggtcaacgccaagcggctgcagcacccccaggccgagatgatcgag
aaggacatgaggcagctgagagagaaggtgatgaagctgaaggaggaccacgaccggatc
taccacctgacccgcaccgagggcctgcccagcatcaactggggcaacatgatggatgag
aagctggacaacctgaacaacaaggcctttggccaggacctgccgtcagtggagaacgag
gtggaggagcacaacatcttccacagcgaggtggaggctctcgcccctcacatctcctcc
ggcggagacaaggaatacgtcagtagcctccagatgaagtacgccaaactactggccagc
tccagcagccggcagcgccacctgctgggcctgcgggactacatgcagcgctgcaccaac
gagctgtactggatggaccagcaggcggaggagagggtcaactacgactggagcgacacc
aacctcgactaccccgcccgccagaggcagtacgagaacttcattggtaaatgtcttgag
tccaaagaggccacaatcactaaactgaacgatgatggagagaagctgatagcatcggac
catccagggaagaacgtcatcgaggctcatacggaggccgtgcacgctgactggaaggag
tacctgaacctgctcatctgtgaggagaaccacctcaaatacatggacgagtaccacaag
taccacaaggaggcgcgggacactcaggacctgctgaagagaatggacacggagctcagc
cagaagtacaacccggagttcaaagacgtgtatcagatggagggtctgatcagagagctg
gatgaccaagctaaggccatggaccactttgatgaccgggtgaaggctcttcagaagcgc
ggcctgcaggtttcgcctctgaagtaccgtcgggagacccccccgaagatgctgcctgtt
gaggctctgtgcgagttcgacacagatgatggggcgattttgcgtggggagaggtacact
ctgctccggaacaacgggaccaaatgggacgtgaaggacgctgctggacatcagctcaca
gcccctgccgtctgcttcatggtcccccccaccgaccccgaggcagtggcagtctctgac
aacctggccggccagcagaagagtgtgaagcagaggatatccggcagcaagaccgttctg
gccaaacgcttcgaggagctgcagaaggcgagcgggaccggcaccacagataagcaggag
cagcagtgccgccagctgatggccgggatggacaaagtggtgagtgacctggacaaacag
gagaaggccatccaagctcgtgttcgcccccccctggagcagacccggcccctgcaggac
agcgctgaccgcctgcaggatatgagggatatcgctgctgctgtcagtaagatcgaacca
gagaagtcctctaaagtgcaggagtcaaagagcttcctggtttcaaacccaacctgtgcc
agcgctcctcaacttcacagcaaggtggacgaagccagcaagaagttctccaacatcgag
cagctcctgcagagctctcaggagaaactgaaaaattccaaccagctggagacttctctt
caaaatggaaagactctgctgtcctcctacgagaacaagctggccagggaggaggtggct
ccatctgacatctcctctctggagaaaactcagcgggaacttggggatattgcttcagac
ctgcggaccaagaggtcagtgatcgctgagacggagcagagcctgcgcctggccaaaagc
agctgtgacaccatggcaactaaattccaagagcactgccccgacatcgagaggcaggag
gcggacgtccagaagctcaacaagcggttcaacaacctcaataggcagaccgacaccagg
tctcagagcttgcaaagagccaagatgtcttacagcaattaccgcaatgattatgacaat
ctgaacaactggctgtctcgcgtcccaaactacgagcccaatgaaactgataactcgagc
caagtggagaccaagctgaagaatcagaggaacttgctctctgatattgccagaaaagag
tctgaattgaacaatgtgtcaaaaaatgcccagctctaccaacaagctatcaaagactac
gagaatgaaactgagaagttcagatccatccttgaccttgaggatggacttgttcctcag
acatacaagaggaacagactggaatcacctgcactgatagtcaaggcagaggaagctgct
attgaggccaagttcactgaggtgaatgctgtgaacaagcaaaggcttcagagtctggaa
ttcactcaaagtcttctcaaccagcaacctgagatctctatgatccaggctacaaatgtc
aagtcagtcaattcttctgtctcgggagaagagccatggagaatcaagaagcagctggat
gatgaggtccagaggagggaacagctagagagagaaattgaaactatccagactgacatc
tatgtccttgaaggacagaggccccaagacacaattgtcaagaaggagcttatcaaaaag
gttcctgacccccagcttgatgaggaagtccataaggtccagcagaaactctcagaggag
cgccgcactacccatgtcatggagaatgaccttgaggtactgaagctgaagctgcgtggc
cttgatacagaactcaaagaaggggcacagcaatacactgtcaaggaggtcctgcgtatt
gagagagatcgtggtcaggaggaggagatgcgtaagcttcgagaggaactggatgagcta
agaaggaacaagttgatgaaggacaatgagctgattctgattcaaaagcaggtgacactc
ctggctgaggaaaagaacaaggaacaggaggtcatcactgaagaggaagtgatcaaagtc
caaaatgatccccagcttgagacagagtaccgagtgctattggacaggaagcagaaggca
atagatggcaggaagcagctggaggatgaacttcagtttcttcaggagaagctcagaagg
atggagaaagagaaatcaatggcagaggaaaagatttccatcaaagaggttctgaaagta
gagaaagatgttgcctttgaaagagaggtagaaaacctcagaaagcagtatgaagatgag
aaggccaaacgaagatcatcacagcgcgaaaagactgacttgcagaggaaaattaccagc
ctagaggaggagaagtctaaggttgttattcaggagaagatgcgggagatcgtccgccca
gatcccaaggctgagaatgaggtggccaatctgcggcttgaacttgtagagcagcagagg
cgctatagggattcagagctccagatcagaaccctgcaggatgagcataccacgctgagg
aaccgaggacctcaagtggagatcaaagagatcattaaagaagtcatcaaatacaagacg
gacccgcagactgaacgagaactggagagacttcgcaatgaaattgtagataaaacccac
cagactgagaaatctgagatggaaatccgccaacttcgtgatgaaattcaaagatggaag
gacaccaaacctcaagtgcagaccaaagaggtggtcaatgaagtgctgcagtacagagaa
gaccctaagactaaggaggaaattgagactctcaaaaggaaactggctgatgaacagaag
aaacgccttgaccttgagggagaacgatcagttcaagaagagaagatcagactgaggaaa
attgatctgtctcaagtccgtgaaaaggttgttcagcaagaagtggtcaagatggaagaa
gatcctatcctcagatcagagtgtgacaccttcttacaaaatatcaacaatgagcagaaa
caaaaggacagcctgaaaactgagctctaccaactgcagagacaaaaggctgatctggat
ctgcaactcgaagagctggaacgtgagcgtagggcaaggcgcgatgcagaattggagatc
caaagacttcgtgtcacacttaatgagcttgagatccgcgacaaagagaaccgtgagaag
gtgactgtcaaacagaaggtagtcttgcagcaggatccccaacaggagaaagaacactcc
atcctcagactacagcttgatgaagagaagcacaaacgcactctgcttgagaaagagctg
aatgtcctcatccagcagcagatcaccctggagaagatggatgtgaaagaaagagttgtt
cgcacagagaaagttcaagtagaaagggaccccgaggctgagattgagattgagaaccta
aagaagactctggaagaagagaaaagaagaaggagagaactcgatcaggagtttaccacc
ctcacttctaggctctctgatatggagttctcaagcaccaaatcttcgaaagaactgcac
tacatccgtgatgaaagcagtcgtctgcaacaagaaaaccaaaggctccagaatgagatc
cgcaagattcgctcagagatcgatatcaccagcaaagagactaggcttatcacagagtct
gcaccaagggatgatggaaagaacctggagttgaggcttgattcactacagagagaacta
gcagagctccgaggcattaccacacaaaaggatgaggaggttgaaaggcttcagaagaac
ctggtggcagtgagacagaagaaggaacagagggagagccatctccgtaggtctatcgtg
atcattgaccccgactcaggcaaagagatgagaccagaggaggcctacaaactagggctg
attgactggaagatgtttgtcaacctgcagagccaggagtgtgactgggaggagatctca
gtcaagggccccaaaggagaatcctcggttctgcacgacagaaaatcagggaaaaagttc
tccatcgatgatgcgttgcgtctcgggcatatcacaaatcaccagcttcagcagtacatg
aacaaagaaattaccatccaggagtttggtgttatggtatcgggcaagaccatgtga
DBGET
integrated database retrieval system
