Trematomus bernacchii (emerald rockcod): 117469338
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Entry
117469338 CDS
T09643
Symbol
gspt1l
Name
(RefSeq) G1 to S phase transition 1, like
KO
K03267
peptide chain release factor subunit 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117469338 (gspt1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117469338 (gspt1l)
03012 Translation factors [BR:
tben03012
]
117469338 (gspt1l)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117469338 (gspt1l)
Translation factors [BR:
tben03012
]
Eukaryotic type
Release factors
117469338 (gspt1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
117469338
NCBI-ProteinID:
XP_033969660
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MDPRDTAPDSWEQEDDVEATIDGTLEEAFTAFNVNAKPFVPNVNAVEFVPTFPMNEHSEN
LDSVVAVEKISSMDVLESAAPVENGDSEMTTEEPWDQKEAEPNEEVPGGDSCGDRGPSEE
AVTEEVAPEIIEEEEEAPAPKVPPTQPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVRHLIVLVN
KMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPTDMCSWYI
GLPFIPQLDSLPSFNRSTDGPVRLPIVDKYKDMGTVILGKLESGCISKAQQLVMMPNRHT
VEVLSLLSDDVETDDAEPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVQITALICMVDKKTGDKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacactgcccctgattcctgggaacaagaggacgatgtggaggccaca
atcgacggaacacttgaagaagcattcacagcctttaatgtgaacgctaaaccatttgtg
cccaacgtgaatgccgtcgaatttgttccgacttttcccatgaatgaacactcggaaaat
ctcgattctgtcgttgctgtggagaagatatcctcaatggacgtgttggaaagtgctgct
cctgtggaaaacggagactcagagatgaccacagaggagccgtgggaccagaaagaggcg
gagccaaatgaggaggtgccgggaggcgactcctgtggggaccggggcccttcggaggag
gctgtgacggaggaggtcgctccggagatcattgaggaggaggaggaagcaccagcaccc
aaagtcccccccacacagcccgacgccccgaagaaggaacacgtcaacgttgtgttcatc
ggacacgtagatgctggcaagtccaccattggcggacaaatcatgtatctgacaggcatg
gtagaaaagagaaccttggagaagtacgagagagaagccaaggagaagaacagggaaacc
tggtatctgtcctgggctttagacaccaaccaagaggagagggacaaaggaaagacggtg
gaggtgggccgagcgtactttgagacggacaaaaagcactttaccatcctagacgctcca
ggccacaaaagctttgtccccaacatgattggaggagcgtcacaggccgaccttgctgtt
ctggtgatctctgccaggaaaggagagtttgaaactggttttgagaagggtgggcagacg
cgggagcacgccatgttagccaaaacggcaggggtcaggcacctgatcgtactggtgaat
aaaatggacgaccctacagtcaactggagcctggagagatatgaggagtgtaaggagaaa
ctagtgccatttttgaagaaggtgggcttcaacccaaaaaaagacattcacttcatgccg
tgctctggactcacaggggccaacctgaaagagcccactgacatgtgctcctggtacata
gggttaccattcattccacaattggacagtttgccaagttttaacagatccactgatggg
ccagtcaggttgcccatcgtagacaaatacaaggacatgggcactgtgattctgggcaaa
ctggagtcgggctgcatcagtaaagcacagcagctcgtcatgatgccaaacaggcatacg
gtggaggtgttgagtctcctgtcagatgacgtggagacggacgacgccgagccgggggaa
aacctgaagctgcggctgaagggcatcgaggaggaggagatcctgcccggcttcatcctg
tgtaacgccgagaacctgtgccactccgggcgcaccttcgacgcccagatcgtcatcatt
gaacacaaatccatcatctgtccgggttacaacgccgtgcttcacattcacacctgcatt
gaagaagtgcaaattacagccttaatctgtatggtagacaagaagacaggagacaagagt
aagacacgaccacgattcgtcaaacaggaccaagtctgcatcgcccgtctgcgcactgca
gggaccatctgcctcgagaccttcaaagactttcctcagatgggacgcttcaccctacga
gacgaaggtaagaccatcgccatcggtaaggttctgaagctggtagcggagcgggactga
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