KEGG   Trematomus bernacchii (emerald rockcod): 117469347
Entry
117469347         CDS       T09643                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04137  Mitophagy - animal
tben04144  Endocytosis
tben04145  Phagosome
tben04148  Efferocytosis
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117469347
   04145 Phagosome
    117469347
   04137 Mitophagy - animal
    117469347
   04148 Efferocytosis
    117469347
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117469347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117469347
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117469347
   04031 GTP-binding proteins [BR:tben04031]
    117469347
Membrane trafficking [BR:tben04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117469347
 Endosome - Lysosome transport
    117469347
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117469347
  Exosomal proteins of other body fluids (saliva and urine)
   117469347
  Exosomal proteins of colorectal cancer cells
   117469347
  Exosomal proteins of bladder cancer cells
   117469347
GTP-binding proteins [BR:tben04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117469347
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16
Other DBs
NCBI-GeneID: 117469347
NCBI-ProteinID: XP_033969670
LinkDB
Position
Unknown
AA seq 220 aa
MAGRGGPARTNSTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQQSTIGAAFLT
QTVCLDDTTVKFEIWDTAGHERYQSWVPLYYRGAQAAIVVYDITNTDTFTRAKNQVKELQ
RQASPNIVIALAGNKADLANKRAIDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGAAGAGGRAQGGVDLQEAAPQGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggcggaccagcacggaccaacagcaccgcagcgagcaacaagatctgc
cagtttaagctggtgctgctgggggagtccgcggtggggaagtccagcttggtgctgcgc
tttgtcaagggccagttccacgagtaccagcagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgacacaacagtgaagtttgagatctgggacactgccggacac
gagcgatatcaaagctgggtgcccttgtactacaggggagcccaggccgccatcgtggtc
tacgacatcaccaacacagatacattcacacgtgcaaagaaccaggtgaaggagctccag
cgacaagccagcccgaacattgttatcgcactggcaggaaacaaagccgacctggccaac
aagagagccatagatttccaggaagcacaagcatatgcagatgacaacagtttgctcttc
atggaaacttccgccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagctccctaagaacgagcctcagggtgcagcgggggccggcgggcgggcccaaggcggc
gtggacctgcaggaagctgcaccacagggcaggagtggccagtgctgtgggggcgggaac
taa

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