Trematomus bernacchii (emerald rockcod): 117469347
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Entry
117469347 CDS
T09643
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04144
Endocytosis
tben04145
Phagosome
tben04148
Efferocytosis
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117469347
04145 Phagosome
117469347
04137 Mitophagy - animal
117469347
04148 Efferocytosis
117469347
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117469347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117469347
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117469347
04031 GTP-binding proteins [BR:
tben04031
]
117469347
Membrane trafficking [BR:
tben04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117469347
Endosome - Lysosome transport
117469347
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117469347
Exosomal proteins of other body fluids (saliva and urine)
117469347
Exosomal proteins of colorectal cancer cells
117469347
Exosomal proteins of bladder cancer cells
117469347
GTP-binding proteins [BR:
tben04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117469347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
AAA_16
Motif
Other DBs
NCBI-GeneID:
117469347
NCBI-ProteinID:
XP_033969670
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNSTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQQSTIGAAFLT
QTVCLDDTTVKFEIWDTAGHERYQSWVPLYYRGAQAAIVVYDITNTDTFTRAKNQVKELQ
RQASPNIVIALAGNKADLANKRAIDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGAAGAGGRAQGGVDLQEAAPQGRSGQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggcggaccagcacggaccaacagcaccgcagcgagcaacaagatctgc
cagtttaagctggtgctgctgggggagtccgcggtggggaagtccagcttggtgctgcgc
tttgtcaagggccagttccacgagtaccagcagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgacacaacagtgaagtttgagatctgggacactgccggacac
gagcgatatcaaagctgggtgcccttgtactacaggggagcccaggccgccatcgtggtc
tacgacatcaccaacacagatacattcacacgtgcaaagaaccaggtgaaggagctccag
cgacaagccagcccgaacattgttatcgcactggcaggaaacaaagccgacctggccaac
aagagagccatagatttccaggaagcacaagcatatgcagatgacaacagtttgctcttc
atggaaacttccgccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagctccctaagaacgagcctcagggtgcagcgggggccggcgggcgggcccaaggcggc
gtggacctgcaggaagctgcaccacagggcaggagtggccagtgctgtgggggcgggaac
taa
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integrated database retrieval system