Trematomus bernacchii (emerald rockcod): 117469358
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Entry
117469358 CDS
T09643
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117469358
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117469358
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117469358
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117469358
NCBI-ProteinID:
XP_033969682
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MENKVEKREQWTRKREYILAAAGNVVGLGNVWRFPYLCYKNGGGAFLVPYCFFALLCGVP
LYLMETAIGQYTQEGAMTCWSKLCPLAQGTGYSYIVIQLYARVYTIILAWALLYLIYCFR
DPLPWATCNNPWNTDRCVDLTSLNSTQTHRGNQSVNWTSGNLTKSSVSEFWERGVLSMSG
GIEELGGVQWEVLLCLLAVWVVCYFCVWKGVRSTGKVVYFTAVFPYVMLAILLVRGLTLP
GAWQGVVYYLYPDPSRLADLQVWMEACAQVLFSYGVASGTHITLSSYNKVTNNCYRDSVW
LCVLNSCTSLVSGFAVFSCLGFMAEKQGIPIEKVVTSGPGLAFIAFPQAVAMMPVPQLWA
ACFFIMLILLGLDTVFTGLETLTSSMIDMFPGQMRRPWRREILLVVFSSFTFLLQITLTT
QGGVYQFELIDYYGANGICLLFVSLVQCVAVGWAFGAERICDALEDMTGQRPGVFYTVCW
RYVTPLICTVCFIGFFLDFQPLKTSDGSVYPNWAYNLGWAIAISSVVTIPIWAVSKIYFT
EGSFRQRLLVLWRPVSDPVGPKTKEERSLNETEMKSLSAPFPDML
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaaagtggaaaagagggaacagtggacgaggaaaagggaatatattctggca
gcagcaggcaatgtggtgggcctgggcaatgtgtggagattcccctacctatgctataag
aacggaggaggtgcctttctggtgccgtattgtttctttgccctgctgtgtggcgtgccg
ctttacctgatggagaccgcgattggtcagtacacacaagagggcgccatgacctgctgg
agcaagctctgccccctggcacagggtactggctattcttatatagtgatccaactttat
gcccgagtctacaccattatcctggcttgggccctcctctacctcatctattgcttcaga
gaccctctgccctgggccacctgcaacaatccctggaacacagacagatgtgtggacctc
acctccttaaactctactcaaacacacagaggcaaccagtcagtaaactggacatctgga
aatctcaccaagtcttcagtctctgagttctgggagagaggcgtgttgtctatgtctggg
ggaatagaggagttgggtggagtgcagtgggaggtgctgctgtgtctcctggctgtctgg
gtcgtttgctacttctgcgtttggaaaggggtccgttccacagggaaggtggtgtatttc
acggctgtgttcccctatgtgatgctggccatcttgctggtcagggggttgacgctgccg
ggggcctggcagggtgtggtctactacctgtatccagatccttctcgcctggcggacctt
caggtgtggatggaggcttgtgcccaggtcctcttctcctatggtgtcgcatcaggaacc
catatcacattgagcagctacaacaaagtcacaaacaactgttacagggacagtgtgtgg
ttatgtgtgctcaatagttgcaccagcttagtttccgggtttgcagtcttctcatgtctc
ggattcatggccgaaaaacagggcattcccatcgaaaaggtcgtcacatcaggcccgggg
ctagcattcatcgcttttcctcaggctgttgccatgatgcccgtgcctcagctgtgggcc
gcctgcttcttcattatgctcattctgttgggactggacactgtgtttacaggtttggaa
acgttaacatcatcaatgattgacatgttccctggacagatgcgcagaccttggcgcaga
gaaattctcctcgtagtcttcagctctttcaccttcctgttacagatcactctcaccaca
cagggaggagtataccagtttgagctgattgattactatggtgccaatgggatatgtctg
ctatttgtgtctttggtccagtgtgtggctgttggctgggccttcggggctgagaggata
tgtgatgcacttgaagacatgacgggacagaggccgggggtcttctacactgtgtgctgg
cgttacgtcacccctctgatctgcactgtttgcttcatcggcttctttctggatttccag
cctctgaaaacaagcgacggctctgtgtacccaaactgggcctacaacctgggctgggcc
atagccatctcctctgtggtcacaatacccatctgggctgtcagcaagatctacttcaca
gagggctctttcagacaacgtctgttggtgctgtggcgtcctgttagtgatcctgttggt
cccaaaacaaaagaagaacgttccctgaatgagacagaaatgaagtcgttgtccgcccct
ttccctgacatgttatga
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