Trematomus bernacchii (emerald rockcod): 117469439
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Entry
117469439 CDS
T09643
Symbol
nup107
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117469439 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117469439 (nup107)
03036 Chromosome and associated proteins [BR:
tben03036
]
117469439 (nup107)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117469439 (nup107)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117469439 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
DUF3990
DUF4485
Motif
Other DBs
NCBI-GeneID:
117469439
NCBI-ProteinID:
XP_033969733
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MDWGQNELPSPVVRDDEVTVAARRRSRRKKVFFPSPDSSPIASTVTPARSMMRNTPASLF
RQAVTPRVPDVSTILAPAGRTPRYTHTPRHGRSSLNLDDSDWTNQTYISPISGLGDTSFF
TEDISNLSSALLKEDDPGDAAAASLFPEFLGSFLKHSSSAVFELLEDYQALCQDKVDVLQ
SVVLRAGQNSKTAGVRWLLQQENCSWRLITSLYRDRVQLAMEDDMMADMVVPSESEKVVV
EQLFQRDAAIRQSQLVVDWLESIXKDQIGDLSDNIEYXDKKVCWENTLHTLKMRRKSSTG
FTVPLVTELDPDAPLRQQRPLVDLDREDDARLMKNLFTLIRAGMTEEAQRLCKRCGQAWR
AASLEGWKLYHDPNMTSGSVALQPVEGNPQRGIWKACCWRMAEEEQLNRYEKAIYASLSG
NLKPMLAVCESWEDCVWAHFRVMVDSLVEKDLVSSGMAHQEVETLPREYLEANWTMEKVF
EELQASELKRVLEETKEHYHVIQKFVILGDIDGLLEEFSDWLTDSKPLPSHLLRFMTHLL
LFYRSLGLALKEEVCVDVLKAYVSLLIRDQQTDLVANYVSQLPSELATVQYAAFLETVTQ
PEIRPRCLQLATDAGLDVAAITKLVVETVRERDETEFTHHSQTLETGTNKEDLSKIDVID
WLLFDPAHRAESLKQSNAIMRKFLAMQKHDAAKAVFSKVPEDSMREIYSQWSGVGQTTPL
PAEDENSIREHLCIRAYLEAHEAFTDWFSHSSSAPQKPAPAPEAKFTERVANEMREKEYQ
SSLSAWSGRLDVLTEDVKERIYNVLLFVDGGWMIDNRQDSEEDSERSHQMAALRSLCLPR
LSFLLLSVLQNSSRHQEALRLADIISSDQHRLYQVFSKEELRRFLQKLRESSLALLDRGL
DPLGYELQP
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggactggggtcagaatgagctgccgtctccggtggttcgagacgacgaggtgaccgtc
gctgcccgtagaaggtcaaggaggaagaaggtcttcttcccgtcacccgacagcagcccc
atcgcctccaccgtcacaccagctcgctccatgatgaggaacactccggcttcactgttc
agacaggccgttactcccagggttccagatgtttccaccattttggctccagcaggtcga
acgcctcgatacacacacacacccagacacggtcgcagcagtttgaatttggacgacagc
gattggacaaaccaaacgtacatctctcctatttctggactgggggacacgagcttcttc
acggaggacatcagcaacctcagctcggctctactgaaggaagacgaccctggagatgct
gcggctgccagtctcttcccagagttcctcgggtcctttctgaaacactcttcctctgcg
gtgtttgagctgctggaggattaccaggcgctctgccaggacaaggtggatgttctgcag
tctgtggtgctcagagccggccagaacagcaagacagccggagtccgctggctgctgcag
caggagaactgctcctggagactcatcacctcgctctatagggaccgggtccagttggcg
atggaagatgacatgatggcagacatggttgttcccagtgagagtgagaaagtggtcgtg
gagcagctgttccagcgagatgccgccatacgacaaagtcagctggtcgttgattggctg
gaaagcatcngcaaggatcagattggagatttatcagataatatagaatactaagacaaa
aaagtctgctgggagaacaccctccatacgctgaagatgaggaggaagagcagcaccggc
ttcaccgtccctctggtcactgagctggacccggacgcccctctccggcagcagcgcccc
ctggtggatctggacagagaggacgacgctcgcctgatgaagaacctcttcacgctgatc
agagccgggatgaccgaggaggctcagaggctgtgtaagcgctgcggtcaggcctggaga
gcagcctctctggagggatggaaactctaccacgaccccaacatgacctcagggagtgtg
gcgctgcagccggtggaaggaaaccctcagagaggaatctggaaggcctgctgctggagg
atggctgaggaggagcagttaaacagatacgagaaagcgatctacgccagcctgagtgga
aacctcaaaccgatgctggcggtgtgtgagtcgtgggaggactgtgtgtgggctcatttc
agagtgatggtcgactccctggtggaaaaagatctggtgtcgtcagggatggcccaccag
gaagtggagacactgccgcgggaatacctggaggccaactggacgatggagaaggtgttt
gaggagcttcaggcctcagagttgaagagagtgttggaggagacaaaagagcattaccac
gtcatccaaaagtttgtcatcctgggagacatcgacggtctcttggaggagttctctgat
tggctgacagactctaagcccctcccctcccacctgctgcgcttcatgactcacctgctg
ctgttttaccgctctctgggtttggctctgaaggaggaggtgtgtgtggacgttctgaag
gcgtacgtttccctcctgatccgggatcagcagaccgaccttgtggcgaattatgtgagc
cagcttccctctgaactcgccaccgttcaatacgccgccttcttagagaccgtcacccag
ccggagatccgcccacgctgcctgcagctcgccaccgatgctggtctggatgtcgctgcg
ataacgaagctggtggtggagacggtgagagagagagatgaaactgagttcactcaccac
agccagacgctggagacaggaaccaataaggaggacctgagtaagatcgacgtcattgat
tggctgctgtttgaccccgcccatcgcgcagagtccctaaaacagtccaacgccatcatg
aggaagttcctggcgatgcagaaacacgacgcagcgaaggcggttttctccaaagtcccc
gaggactcgatgagagagatctactctcagtggtcgggggtcggacagacgactcctctc
cccgcggaggacgagaactccatcagagaacacctgtgcatcagagcctacctggaagcc
cacgaggccttcactgattggttcagccacagcagctccgccccccagaaaccagcacct
gctcctgaggccaaattcaccgagagagtagccaatgagatgagagagaaggagtaccag
tcgtccctgtctgcctggtcgggtcgtctggacgttctgactgaagatgtgaaagagaga
atctacaacgtgctgctgttcgtagacggtggctggatgatcgacaacagacaggattcg
gaggaggattcagagcgcagccaccagatggcggcgttgcgctcgctgtgtttgcctcgc
ctcagtttcctgctgctcagcgtcctgcagaactcctccagacaccaggaggcgctgcgg
ctcgctgacatcatctcctccgaccagcaccgcctctaccaggtgttctctaaggaggag
ctgaggaggttcctgcagaagttgagggagtcgtctctcgctctgttggaccgaggactc
gacccgctgggctacgagctgcagccgtga
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