Trematomus bernacchii (emerald rockcod): 117469444
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Entry
117469444 CDS
T09643
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117469444
Cell adhesion molecules [BR:
tben04515
]
Cadherins
Protocadherins
117469444
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117469444
NCBI-ProteinID:
XP_033969745
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MDTQGAKKRLFWRWHTVCLFTLCTSFLDAVRGQIRYSIPEELEHGAFVGNIAEDLGLDLD
RLSARRFRIVSGSKKQYVEVNLENGVLFVNERIDREELCEQSLSCSFHLQVVIETPLELY
RVEMEILDVNDNSPSFPWTEFNLDISESATPGSRFPLESAQDLDVGSNSLRTYLLSVNEH
FLLDIQTRSDGSKFAELVLQSPLDREQQSAHQMVLTAVDGGAPERSGTAQIDITVLDAND
NAPVFDQSFYRVRLAENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRQLFSVDS
RTGEIKVKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNVLDKNDNLPEVILTSVST
PVQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTSDFLDREA
MAEYNITLTARDMGSPPLFTRKTILVQVSDMNDNAPLFKQPSYTVYLTENNAPGASICSV
TALDPDYGQNAYLSYSILEGDIRGMPVSTYVSINSDNGNIYALRSFDHEQLKNFQITIQA
QDAGFPPLSNNVTVNIFILDQNDNAPVIVTPVVQNSSAPTAAVPKSADAGYLVSKISAVD
ADEGQNSRLLYQMLQATDPSLFSVALYTGEIRTIRQLVEKDPSRHRLVILVKDNGQPPLS
ATVSIILSVVDSLPDSQPDLGDLSLSPHHSPNFSLYLIVSLGAISFTFLVAIIVLVSVRR
LKGRASSRESSFPPISCCCCCSSSESSTTEDVFKKSNLNVRMPAEASGCAEANGNGALPQ
VYCYKMCLTPESSKSDFMFLKPCSPVMTVQQNNAKSTDYLTSGWSALDRNELANNRAASP
NELKYASISNDWTLTKNQRNLAYKRYSSANMEGTLTRQQKYDAHGFSCSVAPQYWTWGSH
MNDCKISLQEGTLPHYSWTPKYTQPSSEAADYQHNVYIPGSTSDYSTLKLAPRGELDVYN
TFSTFGKKKRFISNYEQSFDIDDSLIVSNDIFK
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggacacacaaggggcaaagaaaagactgttttggagatggcatacagtttgcctattt
acgttgtgcacttctttcttggatgcagtccggggacagattcgctactccatccctgag
gaactggagcatggagcttttgttggcaacatcgcagaggacctgggcttggatttggac
aggctctctgcgcgcagattccggatagtctccggttccaagaagcaatatgtggaggtg
aatttggaaaatggagttttattcgtcaatgagagaattgaccgcgaggaactatgcgag
cagagtttgtcctgttctttccacttgcaggtggtcattgaaacccccctggagctgtac
agggtggagatggagattttggacgtgaacgacaactcccctagtttcccatggaccgag
tttaatctggacatctcagagtctgctacgccaggatcccgtttcccacttgagagcgca
caggacttagacgtgggatccaactccctgcgcacatatttgctgagtgtcaacgagcat
ttccttttggatatacagacgcgcagtgatggcagcaaatttgcagagctcgtcctgcag
agcccgctggacagagagcagcaaagtgcgcatcagatggtcctgacggcggtggatgga
ggcgcgccggagagatctggcactgcgcaaattgatatcaccgttttggatgcaaacgat
aacgcgcctgtgtttgaccagtccttttacagagtgaggctggcggaaaacgcacctaaa
ggcaccgtagtcataaaactcaacgcgtcagatttagatgagggtcccaacgctgacatc
acctactcgttcagtggccatgcgcccatcaaggtgcgccagctcttcagcgtggactcg
cgcacgggggaaatcaaagtgaaaggagtgatagactatgaaaaggccaggatgcatgaa
atctatgttcaggctaaagataaaggcccctccgctgtggcagtgcactgtaaagtgctg
gtgaacgttttggataaaaatgacaacctcccggaagtgatcttgacatcagtgtccaca
cctgtgcaggaggacgcccccccggggactgtgatagctgtcatcagcgtgatggataaa
gactcaggtgaaaacgggaatgtggactgtgagatcccacatcacgtgccattccagctc
cactcctcctttaagaactactacacattagtaacttctgattttctggacagagaggcg
atggctgagtataacatcacactaacagcgcgagacatgggctcccctcctttattcacc
aggaaaactatccttgtccaagtgtctgatatgaatgataacgcgcctctcttcaaacag
ccgtcctacactgtgtatctgactgagaataacgcgccgggtgcatccatatgctcggtg
actgcactggatccagattatggccaaaacgcgtacctctcctactctatcctggaggga
gacatacggggaatgcccgtgtccacctacgtgtccatcaactcggacaacgggaacatt
tacgcactgcgatcctttgaccacgaacaacttaaaaactttcagatcacaattcaagct
caggacgcagggttcccgcctctgagcaacaacgtgacagtgaacatctttatactggac
caaaacgacaatgcacctgtgattgtgacaccggttgtgcaaaacagctccgcgccaaca
gcagcagtgcccaagtcagctgacgcaggttaccttgtctccaaaatcagcgccgtggac
gcagacgagggtcaaaactcgcgtctcttataccagatgctccaagcaacagacccgagc
ttgttcagcgtggctctgtacacaggcgagatcaggacaattcgccagttggtggagaaa
gacccctcgaggcacagattggtcattctcgtgaaggacaatggtcagccgcccctctcg
gccactgtttccatcatcctgtcagtggttgacagcctgccagattcgcagcccgatttg
ggtgacctgtcactaagcccgcatcacagccctaacttcagcctgtacttaatcgtgtct
ctgggcgcaatctccttcacatttctggtggctatcatcgtcctggtttcagtgcgcagg
ctgaagggcagagcgtccagcagggagtcaagcttcccccccatcagctgctgctgctgc
tgctccagctcagaatcctccaccacggaagatgtgttcaaaaagtccaatctgaatgtt
cggatgcccgcagaagcgtccgggtgcgcagaggcaaacggcaacggagctctccctcag
gtctactgctataaaatgtgtctgactccggagtcgtccaaaagtgacttcatgttcctg
aagccctgcagcccggtgatgacagttcagcagaataacgccaagagcacagattacctc
acctctggctggagcgcactggaccgtaatgagctggccaacaacagagcagcgtcccca
aacgagcttaagtatgcgagtattagcaacgactggaccttgaccaagaaccaacgcaac
ttggcatacaagaggtatagttcagcaaatatggagggcactcttacccgtcaacaaaaa
tacgatgcccatgggttttcctgttctgtggctccacagtattggacctggggaagccat
atgaatgactgcaagatatctcttcaggaggggacactccctcactactcatggactccg
aagtacactcagccgagttctgaagcggcagactaccagcacaacgtatacatacccggc
tccacgtccgactacagcactctgaagctggctcccagaggagagctggatgtctacaac
accttctctacttttgggaagaaaaagagattcatctcaaactatgaacaatcttttgac
atcgatgatagtctcatcgtgagtaatgacatcttcaaatga
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