Trematomus bernacchii (emerald rockcod): 117469468
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Entry
117469468 CDS
T09643
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117469468 (zc3h12b)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117469468 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
117469468
NCBI-ProteinID:
XP_033969778
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MTVWLMVEKLKMEKRPCREENIDSSEAQHTSDDSEDGSSSESESEEQQHQRVQVSRGKKR
EPLDVAKPHRQLCRSPCLDRPSFSQSSTAQECREDDSSAGSGIKPASEREYQTKMEFALK
LGYSGEQVETVLNKLGSAALINDLLAELVRLGNKVEPEIQPCSSTATSISRPPCVKETVS
PEVSMEDDSSSDIFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITVF
VPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLSYDSDG
IIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVV
PEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALVKCG
TGPATVKGDSISEVKRVAPKRQSDPSIRSVACEPPEALSVARKSEANSVPSLVSALSVPT
MQPVKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASITYNDQFP
KYDSVSDHGYYSLHSDFSTMSMGSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNSDS
FSSYGDMYQGSVDSSLEEGMKGQQQSPAPGRMQAFSHGFRHEALTRVQSYGPEEPKQGPR
KLPGSRLAPHIQHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDS
NPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWN
SPWEMPSAAEHQERYAIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVTK
LRSCH
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgacagtatggttgatggtggagaagctcaaaatggaaaaacgcccatgcagggaggag
aacattgactcaagcgaggcccagcataccagtgatgattccgaggatggaagcagctca
gaaagcgaatccgaagagcagcaacaccagagggtccaggtgagcaggggtaagaagagg
gagcccttggatgttgccaaaccccatcgacagctctgtcgctctccatgccttgaccgg
cccagtttttcccagagtagcaccgcgcaagagtgtcgtgaagatgactccagcgcggga
tccgggatcaagcccgccagtgagagagagtaccagactaagatggaattcgcattgaag
ttgggctattctggagagcaggtagagacagtgctcaacaagctggggtctgctgcactt
atcaacgacctccttgctgagttagtaaggcttggaaacaaagtagaacctgaaattcaa
ccttgcagcagtacggccacatcaatatcccggcccccctgtgttaaagagactgttagt
ccagaggtgtcaatggaagatgactcctcgtcggacatctttgataacctcaggcccatc
gtcatcgatggctccaatgtggcaatgagccatggaaacaaggaggtgttctcttgccgt
gggatccaactcgctgttgaatggttcttagagaaaggacacaaagatatcactgtgttt
gtccccgcctggagaaaggaacagtcaaggccagatgccctcatcacagatcaagaaata
ttacgcaagctggaaaaagagaagatcctggttttcactccatctcggagagttcaaggc
aggagagtggtgtgctatgatgatcgcttcatagtgaagctgtcttatgattctgatgga
attattgtgtcaaacgacaactacagagacctgcaaaatgagaaaccagagtggaagaag
ttcatagaagagcgtctcctaatgtactcatttgtcaatgacaagttcatgccgcctgat
gatccattgggaagacatggtccaagcttagaaaatttccttcgcaagcgtcctgttgtt
ccagagcacaaaaaacaaccttgcccctatgggaaaaagtgcacatatggacataagtgc
aagtactatcatccggagcgtgtcaaccagccacagcggtcagtcgctgatgaactgcgg
gcttttgccaaattgtctgcggtgaagacaatgagtgagggggctttagttaaatgtggt
actggtccggcaactgttaagggggatagcatctctgaggtcaaacgggtggcacccaaa
cgtcagtctgaccccagtattcgctctgtggcctgtgaacccccagaggcactgtccgtt
gctaggaagtctgaggcaaattcagtgccttcccttgtgtctgctctcagcgtgcccacc
atgcagcctgttaagagccacgcagctggggccttgaacacacgatcagccagcagccca
gtgccgggttctttgcagtttgcgcacagttctctagagcacatgtccagtgtacagtac
cctcctattttagttactaatagtcatggcgcctctataacttacaatgaccagtttcca
aagtatgactcagttagcgaccatggatattattcactgcacagtgatttttcaactatg
agcatgggcagcatgcataacgtggacagtttctgtagcatggagcacgagcatggcgtg
tatcagagaaatcccagccactgccctgagtcctgcctcagccattcaaacagtgactcc
ttctcctcttacggggacatgtaccagggctctgtggacagtagcttagaggagggcatg
aaggggcagcagcagtctcccgcaccgggtaggatgcaagctttctcccatgggtttcgt
catgaagcgctgactagagtacagagttatggccctgaggaacccaagcaggggcccagg
aagttgcctggatcgcgtctagcaccacatatccagcacgttgcggtgggagccaggtcc
agctgtcctggagactatcccctcactcagaatgtcctcccacctctgtcctcgcagccc
acaaggtctctcggtatgacccggatggacagcatatcggactcaaggctgtatgatagc
aacccaatgagacagaggcgacctccactgtgccgcgagcagcatgcgagctgggaccct
ctgccttgcggtaatgagtcctatggatatcattcatatcctttgagtaacagcctgatg
ccgtgttgcgagcgagtgatggtccgcagcatgccagacaaaatggaacaaatctggaat
tcgccttgggagatgccctctgcagctgaacaccaagagcggtatgccatcccggaccac
cagtatcaaacatatcgcaacctttgtaacatctttcctgcttatgttgtccactcagtc
atggagaaaaaccctcatttgaccgatccacaacagcttgcagccgtcattgtcacaaaa
ttgaggtcatgccattaa
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